KEGG   Setaria italica (foxtail millet): 101766280
Entry
101766280         CDS       T02818                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03030  DNA replication
sita03410  Base excision repair
sita03420  Nucleotide excision repair
sita03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101766280
   03410 Base excision repair
    101766280
   03420 Nucleotide excision repair
    101766280
   03430 Mismatch repair
    101766280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sita03032]
    101766280
   03036 Chromosome and associated proteins [BR:sita03036]
    101766280
   03400 DNA repair and recombination proteins [BR:sita03400]
    101766280
DNA replication proteins [BR:sita03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101766280
  DNA Replication Termination Factors
   ELG1-RFC complex
    101766280
Chromosome and associated proteins [BR:sita03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101766280
DNA repair and recombination proteins [BR:sita03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101766280
  Check point factors
   HRAD17(Rad24)-RFC complex
    101766280
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 AAA_assoc_2 AAA_22 AAA_16 AAA_11 AAA_5 ATPase_2 DUF815 AAA_7 RuvB_N bpMoxR AAA_14 DNA_pol3_delta AAA_19 AAA_24 ResIII AAA_30 nSTAND3 AAA_18 AAA_3 AAA_2 VESA1_N TniB TIP49 DUF3086 AAA_28 MCM SLFN-g3_helicase
Other DBs
NCBI-GeneID: 101766280
NCBI-ProteinID: XP_004954087
UniProt: K3YTJ9
Position
I:complement(39458515..39461913)
AA seq 361 aa
MAGATAATPMDVDAAAPPPPPAGAAAKGKAPLNAPGRAAPWVEKYRPQSLADVAAHRDIV
DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVR
LQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVN
KIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNI
LQSTHMASQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFKHISDMKMRKGLALVD
IIREVTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTSARTAMVAA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcgggagccaccgccgccactcccatggacgtcgacgctgccgcgccgccccctccg
ccggccggggcggcggcgaagggcaaggccccactcaacgcgcccgggagggctgcgcca
tgggtggagaagtaccggccccagtccctcgccgacgttgccgcccaccgcgacatagtc
gacaccatcgacaggctcaccaatgagaatagacttcctcatttgttgctatatggacca
cctggcactggtaaaacatcgacgatacttgcggttgcgaggaagctatatgggtctcag
tatagcaacatgattctggagctcaatgcatcagatgaacgtggtattgatgttgtaagg
ctgcagatccaggattttgctggcgcacgcagcctctcttttggagcaaggccttctgtt
aagttggtcctcctggatgaagcagacgcaatgactaaagatgcacaatttgcattgcga
agagtcattgaaaaatatacaagaagcacacggtttgcgctcatatgcaatcatgtcaac
aaaattatccctgcactacaatccaggtgcactaggtttagatttgctccacttgatggc
agtcatgttcgagagcgccttcaacatataataaaatccgaggggctcagtgtagatgag
ggtggcttgacagccctagtgcggttgagcaatggtgatatgaggaaggctttgaatata
ttgcagtcaacacacatggcatcccaacaaatcacagaagaagctgtctatctttgcaca
ggaaaccccatgccaaaagatattgaggagatagcattttggctactaaatgaaccattt
tcaaccagcttcaaacatatatctgacatgaagatgagaaaagggctggccttggttgat
atcatacgggaggttactatgtttgtgttcaaaatacagatgccatccgatgttcgtgta
aagctgatcaatgacctggctgatattgagtacaggctaagctttgcgtgcaatgacaaa
ctgcagctgggcgcactgatctcaactttcaccagtgctcgcacagctatggttgctgcc
tcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (47)   

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