KEGG   Serpula lacrymans: SERLADRAFT_452596
Entry
SERLADRAFT_452596 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
sla  Serpula lacrymans
Pathway
sla03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SERLADRAFT_452596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sla03400]
    SERLADRAFT_452596
Enzymes [BR:sla01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SERLADRAFT_452596
DNA repair and recombination proteins [BR:sla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     SERLADRAFT_452596
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT RNA_ligase DNA_ligase_A_C BRCT_3 Solute_trans_a DUF4073
Other DBs
NCBI-GeneID: 18816845
NCBI-ProteinID: XP_007322465
JGI: 452596
UniProt: F8P7U1
Position
Unknown
AA seq 1011 aa
MMQPTPAPSSLPGSPKGDVNSVEESVTYPAPPQNNGSAPFSVLAGLFERLSTERKPERRR
KLLDAWFNHWREEIGHDLYPVLRLILPQKDRERAVYGLKEKNLAKTYIKLIPLGMRDPDA
IRLLNWKKPTEKDKSSGDFPNVLYEVVNKRSSVIEGSLSITDLNEILDELSKNLGKQDIQ
SKILQRVYNRATPEEQRWIVRIILKDMVISVKETTVFGVLHPDAQDLFNTCSDLKKVAWE
LWDPSRRLKAEDKTIQLFRAFAPMLCKRPTRKIEESVKEMQGRKFIIEEKLDGERIQLHK
RGNEYFYCSRKGKDYTYLYGNHVGTGSLTPFIASAFDDRIEDIILDGEMLVWDPVSERNL
PFGTLKTAALDKTKREHNPRPCFKVFDLLHLNGMSLLQKSLKFRKRNLRACIKEIPGRIE
LAVEFEGKTAKDVREKMDEVMAARGEGLVIKHPDSEYVLNGRNKDWIKVKPEYMDNMGET
VDVLVVGGNYGSGKRSGGVSTLICAVLDDRHSSNDDEELKYSSFVRIGSGLTFADYIWVR
QKPWKLWDPNSPPTFLQTAKRSQDDKGDVYLEPEDSFMLKVKAAEITISDQYHLGFTMRF
PRALSIRDDLSIADCMTATAILENLRTERKRKMESDSSMSKKKKSKTKVAKPSMLPEYQG
LKLNSIEIESNIFEDIKFVVSSDPKSRTGDHDKKELMKMIHANGGSCAQVVTNQQPSMVI
YGGSTTPYDIRLLINKDTVDIIRPQWIVDCVARGEILPLKKKYFFHATFDRQQSADYNQP
DTDEDEDEIMADEEDASLRVPVTPDLKGPKVEEADDIDPSLADWFKVGAKAPEDSATESE
TDADSVNDDVNPDEDEDDWFKVKPEGSLIADKSVITDVPDSSAQPKDEDVSMGADSGMEY
DPNLIFRYLCFYLDSPDNARKHGMTVRAKHEKDVAQSFVDISKMIQENGGQVVDLDDPKL
THIVMDKRDDSRRVELIQRTFKPKRRRLVIAGYIQACLEEETLLDEEEFTP
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgatgcagccaacgccagcaccatcgtctcttccaggatctccaaagggcgatgtcaat
tcggtggaggaatcagtcacgtatcccgctccacctcaaaacaacgggagcgctcctttc
tctgttcttgctggtttgttcgagagattatctactgaaagaaaaccggagcgaagaaga
aagttgttggatgcctggttcaaccactggagagaagaaataggccatgacttatatcct
gttctacgcctcattttgcctcagaaggaccgagagcgtgctgtatatggcctcaaagag
aaaaatctggctaaaacatacattaaactaatccctcttggtatgagagatccagatgct
atacgcctgctcaactggaagaagccaactgagaaagataaaagttctggcgacttcccc
aatgtcctttatgaagttgtgaacaaacggtcttcagtcatcgaaggctctctttcaatc
actgacctcaatgaaatactcgatgagctgtctaaaaatctaggcaaacaggacatccag
tcaaagatattgcaacgagtatacaacagagcaactcccgaagaacaacgttggatagta
agaatcatcctaaaagacatggtgatatccgtcaaagaaacaactgtttttggggttttg
catccagatgctcaggacctattcaacacttgttcagaccttaagaaggttgcctgggaa
ctatgggatccctctcgcagacttaaagccgaggataaaactatacaattattccgtgcc
ttcgcaccgatgttatgtaaaaggccaacgcgcaagattgaagagtctgtgaaagagatg
caaggtcgtaagttcattattgaagaaaaacttgatggagagcgcatacaattacacaag
cgcggaaatgaatatttctactgttcaagaaaaggaaaggattatacctacctgtatggc
aatcacgtcgggacgggtagcctgacgccttttattgcttcggctttcgacgaccggata
gaagatataattctcgacggcgaaatgctggtatgggatcccgtttcagagcgcaatctt
cctttcggtactctcaaaacagcagccctcgacaaaactaagagggaacataatccccgg
ccatgcttcaaagtattcgatctccttcatttaaatggcatgtcacttctccagaaatct
ctcaagttccgcaaacgcaatcttcgtgcatgtattaaagaaatccctggtcgcattgag
ttagccgtagaatttgagggtaagactgcgaaggatgtcagagagaaaatggatgaagta
atggcagcaaggggggaaggtttggtcatcaagcatccagattctgaatatgtcctaaac
ggtagaaataaagattggatcaaggttaaaccggagtatatggacaatatgggcgagact
gttgatgtgttggttgtcggtggtaactacggaagtggaaaacgttctggtggtgtttct
actctcatatgtgctgttctcgacgaccggcattcttccaacgacgacgaagagctcaaa
tatagtagttttgttcgcatagggtctggcttgacctttgcagattatatctgggtgcgc
cagaaaccctggaagctttgggatcccaattctccccctaccttcctgcagactgcgaaa
cggtcacaggatgacaagggtgacgtatatcttgaaccagaggattcatttatgctgaag
gttaaggccgctgaaatcacaatatcagatcagtaccatctgggtttcacaatgcgcttc
cctcgtgcgctttctatccgcgacgatctttctatcgcagattgcatgacagcaactgct
atcctggaaaatttacgaactgagagaaagagaaaaatggagagcgactccagtatgagc
aagaagaagaaaagcaaaacgaaagttgcaaagccttccatgctcccagaatatcaaggg
ctcaagctcaattcaattgaaatcgagtcaaatatatttgaagatatcaagtttgtggta
tcttcggatccgaaatcgaggacaggagaccatgacaaaaaggagctgatgaagatgatt
catgccaatggtggtagctgcgctcaagtagttactaatcaacagccaagcatggtgatt
tacggtggttcgacaacaccatacgatattagacttttgatcaacaaagacactgttgac
attatccggccacaatggatcgtagactgcgttgctcgcggggagattctcccgctcaag
aagaagtattttttccacgcaacgttcgatcgccaacaatctgcggattacaaccagccc
gatactgatgaagacgaggatgaaattatggccgatgaagaggatgctagtttacgtgtt
cccgtgacccctgatctgaaggggcccaaggtagaggaagctgacgacatagatccctca
ttggcagactggtttaaagtcggagcaaaagcgcctgaagatagcgccaccgaatcagaa
acggatgccgactccgtgaatgacgatgtgaatcctgatgaggatgaggacgactggttt
aaagttaaacctgaaggaagtctcattgcagacaagagcgttataacagatgtgccggac
tcaagcgctcaacccaaggatgaagatgtttcaatgggggcagattccggtatggaatac
gaccccaatttaatctttagatacctatgcttctacctcgattcaccggacaacgctcgc
aaacacggaatgacggtgcgagcgaagcatgaaaaggatgtcgctcagagtttcgtcgac
atctcgaagatgattcaagaaaatggcggacaagtggtggaccttgacgaccccaagctc
acacatatagtaatggataagcgggatgattcccgtcgtgtagagcttattcagcgcacg
ttcaagccaaaacgacgtcggttggttatagctgggtacatccaagcctgcctagaggaa
gaaactttgttggacgaagaagagttcactccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (52)   

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