KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111659968
Entry
111659968         CDS       T06058                                 
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111659968 (ddx46)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slal03041]
    111659968 (ddx46)
Enzymes [BR:slal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111659968 (ddx46)
Spliceosome [BR:slal03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111659968 (ddx46)
 Complex B
    111659968 (ddx46)
SSDB
Motif
Pfam: DEAD Helicase_C CdAMP_rec
Other DBs
NCBI-GeneID: 111659968
NCBI-ProteinID: XP_023268836
Ensembl: ENSSLDG00000016854
Position
Unknown
AA seq 1063 aa
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDDRDRDRSRRERSRSRDRRRSRSRDRK
RARRSRSRDRRRSRSRDRRRSGSRSRARRSRSASPSKSRRIDEKSRSKEKDNVDPVSDKK
KVKEEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQG
KKWSLEDDDDDDEEGSALMEADDDEDGEGKGERKDKEIKEEKKEEGEKEKETPMEQQAEE
DDVDPLDAYMEEVKQEVKKFNMGAMKGNDKKGAMTVTKVVTVVKTKKGPHTHKKKGELME
NDQDAMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHGKIQYESYRKNFYVEVPELAKMT
TEEVNAYRLDLEGIIVKGKGCPKPIKTWVQCGVSMKILNALKKHSYEKPTPIQAQAIPAI
MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECK
KFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYV
VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILAKPIEVQVGGR
SVVCSDVEQHVLVIDEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPC
MSLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYSCPNHYEDYVHR
AGRTGRAGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPPELEQLWASFKDQQKAEGKT
IKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKR
VKDLSAPGAATGPAGAVATTAAASGGLPGLGPTSAGNIQKLEMAKRLALKINAQKNLGAE
AQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAET
VKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYL
AIESANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq 3192 nt   +upstreamnt  +downstreamnt
atgggccgtgagtcgagacactacaggaagcgctcggcgtctcggggacggtcaggtagc
cgatcaaagagtcgctccccggacaaacgctccaagaaagacgatagagaccgagaccga
agcaggagggaaaggtcacggagccgggaccgccgaaggtctcggtccagagacagaaaa
cgggccaggcgatccaggagcagagacaggaggagatccagaagcagagacagaaggagg
tcaggcagcaggagcagagcccggaggtctcgatctgccagccccagcaagagcagaaga
atagatgaaaagtcaaggagcaaagagaaagacaatgtcgatcctgtatctgataagaaa
aaggttaaagaggagaaagaggatgagaaggttgaggatcaagactttgaccaaaacaaa
ctggaggaggagatgagaaagaggaaggaacgggtggagaagtggagggaagagcagagg
aagaaggccattgaaaacatcggcgagatcaagaaagagctggaggagatgaagcagggc
aagaaatggagcctggaggatgatgatgacgatgacgaggaaggttcagcgctgatggag
gcagacgatgatgaagatggagaggggaagggggagaggaaagacaaagagattaaagag
gagaaaaaagaggagggtgagaaggagaaggagactcccatggagcagcaggctgaggag
gacgacgtggatcctctggacgcctacatggaggaggtgaaacaggaggtgaagaagttc
aacatgggagcaatgaaaggaaatgataagaaaggagcaatgacggtaaccaaagtggtg
acagttgttaaaaccaagaaaggacctcacactcacaagaagaagggtgagctgatggag
aatgaccaggatgccatggagtactcgtcagaggaggaggaggtggatctgcagacggct
ctgacaggcttccaaaccaaacagaggaaaatcctggagcctgttgaccacgggaagatc
cagtatgagtcgtaccgcaaaaacttctatgtggaagtgcctgagctggccaagatgact
acagaagaagtgaacgcatacaggttggacctggaaggcatcattgttaaaggaaagggc
tgccccaagcccatcaagacctgggtgcagtgtggggtgtcaatgaagatcctcaacgct
ttgaagaagcacagctacgagaagcccacccccatccaggcccaggcaatccctgcgatc
atgtcaggccgagacctgattggcatcgctaagaccggcagcgggaaaaccatagccttc
ctgttgcccatgttccgacacatcatggaccagaggcccttggaggagtctgagggaccc
atctctgtaatcatgactccaaccagagagttggctctgcagatcaccaaggagtgtaag
aagttctctaaacctctgggcctcagggtggtgtgtgtttatggaggcacgggtatcagc
gaacagattgctgagctgaagagaggagccgagatcattgtgtgcacaccaggaagaatg
attgacatgttgggggccaacagcggtcgagtcaccaacctgcgcagagttacatatgtg
gtgttggatgaagcagacaggatgtttgacatgggcttcgagccgcaggtgatgcgtatc
gtggacaacgtgcgtccagaccgtcagacagtcatgttttcagccaccttccccagagcc
atggaggcgctggctcgtaggatcctagctaagcctattgaggtccaggtgggaggccgc
agtgtcgtctgctctgatgtggaacaacacgtgctggtgattgatgaggacaagaagttc
ctgaagctgctggagattctgggtcactaccaggagaagggttcggtcatcatctttgtg
gacaaacaggagcatgcagacggactgttaaaagacctgatgaaagcctcgtacccgtgc
atgtcgctgcatggaggaattgaccagtacgacagagacagcatcatcaatgacttcaag
aatggagcttgtcgtctgatggtggccacctctgtggcagccagaggcctggatgtcaag
cagctgatcctggttgtcaactacagctgtcccaaccactacgaggactacgtccacagg
gctggacgcacaggccgagcaggcaacaagggatacgcctacaccttcatcacagaggat
caggttcgctatgctggtgacatcatcaaagccttagagctctcaggttctcctgtccca
ccagagctggagcagctttgggcctccttcaaagaccaacagaaagcggagggtaagacc
attaagagcagcagcggcttctcaggaaaaggcttcaagttcgacgagacagaacacgcc
ctggccaatgagagaaagaagctgcagaaagctgctctcggactgcaggactctgatgac
gaggatggagccctagatatcgaggagcaaatcgagagcatgttcaactccaagaagagg
gtgaaggatctgtctgctcctggagcagccaccggtcctgcaggggcagtcgccaccacg
gcagctgcctctggagggctgccaggcctcggacccacatctgctggaaacatccagaaa
ctggagatggccaagaggctggcgctcaagatcaacgctcagaagaacctgggcgctgag
gctcaggacgtgatgcagcaggccacaaacgccatcctgcggggcggcaccatcatgact
ccctctgtgtcagccaagaccatcgctgagcagctggcggagaagatcaatgccaagctg
aactacacccctgtggagaagctggaggaggagcggcaggcagctgaacaggcagagacc
gtcaagagatatgaagaggaactggagatcaatgacttccctcagacggccaggtggaag
gtgacatctaaagaagctctgcagaggatcggtgaatactctgaagccgctatcaccatc
agaggaacctatttccctccaggcaaagagcctaaggagggagaacgcaagatctacctg
gctattgagagtgctaacgaactggctgtgcagaaagccaaaacagagattacacgatta
atcaaggaagagctcatcagattgcaaaattcctaccagccaacgagcaaaggccggtac
aaagtgttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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