KEGG   Sulfurovum lithotrophicum: YH65_01945
Entry
YH65_01945        CDS       T03877                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
slh  Sulfurovum lithotrophicum
Pathway
slh03030  DNA replication
slh03430  Mismatch repair
slh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YH65_01945
   03430 Mismatch repair
    YH65_01945
   03440 Homologous recombination
    YH65_01945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slh03032]
    YH65_01945
   03400 DNA repair and recombination proteins [BR:slh03400]
    YH65_01945
Enzymes [BR:slh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YH65_01945
DNA replication proteins [BR:slh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     YH65_01945
DNA repair and recombination proteins [BR:slh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     YH65_01945
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_14 AAA_22 AAA_19 AAA_30 DNA_pol3_gamma3 AAA_5 AAA_24 Mg_chelatase AAA_16 UPF0242 Glyco_tranf_2_5 AAA_assoc_2 Rep_fac_C
Other DBs
NCBI-ProteinID: AKF24295
UniProt: A0A7U4LZV8
Position
complement(394355..396349)
AA seq 664 aa
MSLALARKYRPATFDDLIGQDSVSQTLSLALDGNRLSHAYLFSGLRGSGKTSTARIFAKA
LLCEEGTTSHPCGTCTHCIMAAENRHMDIIEMDAASNRGIDDIKDLIEHTKYKPSSARYK
IFIIDEVHMLTNQAFNALLKTLEEPPDFVKFILATTDPLKLPATILSRTQHFRFKKIPQN
LVLSHLEHIMNLEKIEYEKEALEIIARSGAGSLRDSLTLLDQAIVYSKNFVDVGTVTGML
GIIEPSLLEELLGDIVKKDITKILEFIKLASDYEAEMILDELTLYLKELLLTGSGQLNPM
IIERFFRVIAESKSLLALGSDGEFVLSLALFKMMEALEIKDIDTMIRGLEKELKGVEVSE
IMVSTPVPDLSTPSEVITITEEEIVATLPKVSVEPPAPSEAKETVNEQTSQSRAQETENK
EETTKVTEQSVETTAAPLNIQETQQTQAEEQVQTSVTEENIASPEKTESAKEPARQSQQP
VDNSSKEKFKQLIAKIYDRNYDLGSCFERNIEFESFSENRLTWNSTAEGNEKKMLVNNWG
LINMFVKELFGYETKIVNIAKKKTITTSSEQVAGNNEGADSEEISSLNVQHSTLNTQPAK
PVHNDADTGSMIEDVEMKSSCIAPEAGETEAAQEKDPSTLLEEPMVKAAMELLNPKKVRI
KKNV
NT seq 1995 nt   +upstreamnt  +downstreamnt
ttgtcattagccttagcaagaaaatatcgtcctgccacctttgatgacctcatcggacag
gattccgtctcccagacgctctcgcttgcacttgatggcaacagactctctcatgcctat
ctcttctccggtctcaggggaagcggcaagacctccactgcccgtatttttgccaaagcg
ctgctctgtgaagagggaaccacctctcacccgtgcggtacctgtacccactgtatcatg
gctgcggagaaccgccatatggacatcatagaaatggatgctgcctccaacagaggtatc
gacgatatcaaagacctcatcgagcataccaaatacaaacccagctctgcacgctacaaa
atcttcattatcgatgaagtccatatgctgaccaaccaggcctttaacgctttacttaag
accctggaagagccgcccgattttgtcaaattcattctggcaacgaccgatccgctgaaa
ctacctgcgaccatcctctccaggacacaacacttcaggttcaagaagatcccccaaaat
cttgtactcagtcaccttgagcatatcatgaaccttgaaaagattgagtacgaaaaagaa
gcgcttgagatcattgcccgttcgggtgcggggagtctgagagattcactcaccctctta
gaccaagccatcgtctactccaagaacttcgtagatgtcggtacggtcaccggtatgctt
gggatcatcgaacccagcctgctggaggaactgcttggcgatatcgtaaaaaaagacata
acaaagatactcgaattcatcaaactggcctcggactacgaagcggagatgatcctcgat
gaactgaccctgtatctcaaggagcttttgctgacgggaagcggccagcttaatcctatg
atcattgaacgttttttccgtgtcattgcagagtcaaaaagccttctggccctgggaagt
gacggagagtttgtcctctctctggcactctttaagatgatggaagcccttgagattaaa
gatatcgacactatgatacgcggcctggagaaagaactcaaaggcgttgaggtaagcgag
atcatggtctccacacctgttccagacctctctactccctccgaagtcattaccattaca
gaagaggagatcgttgcaactcttcccaaggtgagcgttgaacccccggctcccagtgag
gcaaaagaaacggtcaacgagcaaacaagccaaagcagagcacaggaaacagagaacaaa
gaagagacaactaaagtcactgaacaatccgtagagacgacagccgcccctctcaacata
caggaaacacaacagacccaagcagaggagcaggttcaaacttctgtaacagaagagaac
atagcaagtcctgaaaagacagagtcagcaaaagagcctgcgaggcagtctcagcaaccg
gtagacaatagcagcaaagagaagttcaaacagcttattgcaaagatctatgaccgaaac
tacgatcttggaagctgttttgaaagaaatatcgaatttgaaagtttcagcgagaacagg
ctgacatggaactccaccgcagaaggtaacgaaaaaaagatgctggtcaacaattggggt
ctcatcaatatgttcgtcaaagagctcttcggatatgaaacaaaaatagtcaatatagcc
aaaaaaaaaacgataacaacgagtagtgaacaggtagcaggtaacaacgaaggagctgat
tcagaagaaatttcttctctaaacgttcaacactcaacgctcaatactcaaccggccaag
ccggttcataatgatgctgatacaggatctatgatcgaagatgttgagatgaaaagctcc
tgtattgctccggaagcaggagaaacggaagcagcccaagaaaaagatccctcgacactt
ctcgaagagcctatggtcaaagcagcaatggaacttttgaatcccaaaaaggtcaggatc
aagaagaatgtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (29)   

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