KEGG   Sideroxydans lithotrophicus: Slit_1520
Entry
Slit_1520         CDS       T01196                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
slt  Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:slt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slt03400]
    Slit_1520
Enzymes [BR:slt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Slit_1520
DNA repair and recombination proteins [BR:slt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Slit_1520
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 Viral_helicase1 UvrD_C_2 AAA_12 AAA_11
Other DBs
NCBI-ProteinID: ADE11756
UniProt: D5CS20
Position
complement(1530777..1532765)
AA seq 662 aa
MSSKLNPTQREAIKYLGGPLLVLAGAGSGKTRVITHKLAYLIEECGYSPRNIAAITFTNK
AANEMRERVGKIMNGRDAKGMTISTFHALGMQILREDGPLLGYKKQFSIFDSADTGKIIS
ELLGSPDKQEIRTAQSVMSNWKAAFLTPEQAGSLAENEEQQRLALLYARYQETLRAYQSV
DFDDLIRLPVELFKTHEEAHQRWQHRFRYLLIDEYQDTNDCQYQMMKLLAGPRAAVTVVG
DDDQAIYAWRGASTANLQNLQNDYPQLRVIKLEQNYRSSQRILQSANHLIKNNTKLFEKN
LWSEHGPGDPVRVFAAKDEENEAESVVLRLLAHKFENNTRFSDYAILYRSNHLSRVFEEQ
LRTHKVPYSVSGGTSFFDHAEIKDLTAYLRLIANPDDDPAFIRAITTPKRGIGNSTLEKL
ASYAGSRNVSLFEAAFESAMAHQLQPRQHEDLLTFCQFINRMQARAEKEPCNEVLNDLLS
AIDYEAWLFDSHEPRQAENKWKNVQDFVGWMNRKSEADEKTMIAMTQLIALLNLLESRDQ
ETDAVSLSTLHAAKGLEFGHVFLIGVEEGILPHERSEAPEQIEEERRLMYVGITRAQRSL
QISYCTRRKRGKEFAGCDPSRFIAELPQADIVYTGVVTAGNAPAVTKEEGMDKLARLKAM
LK
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgtcaagcaaactgaatcccactcaacgagaagcaatcaagtacctgggcggtccactg
ctggtacttgcaggcgcaggaagcggcaagacgcgcgtcattacgcataaactggcctac
ctgatcgaggagtgcggctattccccgcgcaatatcgccgcgatcacattcaccaacaag
gccgccaacgagatgcgcgaacgcgtcggcaagatcatgaacgggcgcgatgccaaaggc
atgaccatcagcaccttccatgcgctgggcatgcagatcctgcgcgaggatgggccgctg
ctgggctacaagaaacagttctccatcttcgatagtgccgacaccggaaagatcatcagc
gagttgctgggcagccctgacaagcaggagatacgcaccgcgcagagcgtgatgtcgaac
tggaaagccgcttttctcacgcccgaacaggcgggcagcctggccgaaaatgaagaacaa
cagcgtcttgccctgctctacgcgcgctatcaggaaacgctgcgcgcatatcagtcggtg
gatttcgacgatctcatccgtctgccggtagagttgttcaagacgcatgaagaagctcat
cagcgctggcaacatcgctttcgttacctgctgatcgacgaataccaggacaccaacgat
tgccagtaccagatgatgaaactgctggccggcccccgtgccgcggtcactgtggtgggt
gacgacgatcaggccatctatgcctggcgcggggcgagcacggccaacctgcaaaatttg
cagaacgactacccgcaattgcgcgtcatcaaactggaacagaactaccgttcttcgcag
cgcatcctgcaaagcgccaaccatctgatcaagaacaacaccaaactgttcgagaagaac
ctgtggagcgagcacggccccggcgatccggtgcgcgttttcgcggccaaggacgaagag
aacgaagccgaatcggtagtactgcgcctgctggcgcacaagttcgaaaacaacacgcgc
ttctccgactacgccatcctctaccgcagcaatcacctgtcgcgcgtattcgaggaacag
ctgcgcacccacaaggtgccctatagcgtcagcggcggcacttcgttcttcgatcacgcc
gagatcaaggacctcaccgcctacctgcgcctgatcgccaatccggacgacgaccccgcc
ttcatccgcgcgatcaccacgcccaagcgcggcatcggcaacagcacgctggagaagctg
gcatcgtatgccggctcgcgcaatgtcagcctgttcgaagccgcattcgagagcgccatg
gcgcaccaactgcaaccgcgccagcacgaagacctgctcactttttgccagttcatcaac
cgcatgcaggcgcgtgccgaaaaagagccgtgcaacgaagtgctgaacgatctgctgagc
gccatcgactacgaggcctggctgttcgacagccacgagccgcgccaggccgagaacaaa
tggaagaacgtgcaggacttcgtcggctggatgaaccgcaaatccgaagcggacgagaag
accatgatcgccatgacgcagctgatcgcgctgctcaacctgctcgaatcgcgcgaccag
gagaccgatgccgtctccctctccaccctgcatgccgccaagggactggagttcggccat
gtgttcctgatcggcgtggaagaaggcatcctgccgcacgaacgcagcgaagcaccggaa
cagatcgaggaagaacgccgcctgatgtacgtcggcatcacccgcgcgcagcgctcattg
cagatcagttactgtacccgccgcaaacgcggcaaggaattcgcgggctgcgatcccagc
cgattcatcgccgagctgccgcaggcagatatcgtttatacgggcgtggtgacggcgggc
aacgcacctgcagtgaccaaagaggaagggatggacaagctggccaggctgaaggcgatg
ctgaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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