KEGG   Solanum lycopersicum (tomato): 101244295
Entry
101244295         CDS       T02665                                 
Name
(RefSeq) transcription initiation factor IIA large subunit
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101244295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sly03021]
    101244295
Transcription machinery [BR:sly03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     101244295
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 101244295
NCBI-ProteinID: XP_004241212
UniProt: A0A3Q7H1I4
Position
6:complement(47594751..47601177)
AA seq 401 aa
MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERN
SAAKATPGGPITPVHDLNMPYEGNEEYETPTADILFPPTPLQTPLPGTAQTPLPGTVQTP
LPGTAQTPLPGTADSSMYNIPTGGTPFTPSDYSPLNDTGGATELKAGPGRPSPFMHPPSP
WLNQRPPLDVNVAYVEGREEGDRGGSQQPMTQDFFMNSTGKRKREDFPPQYHNGGYIPQQ
DGAADSIYDNIKSGEGSNIQLELVTVGPVQAPAYRIPQFDGPIPDSYDDALSTPNIYYQG
VVNEDYNIVNTPAPNDMQAPTPAPLQNDDIDDDDEPLNEDDDDELDDVDQGEDLNTAHLV
LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggcgagttctactaccagcaatgtttacatccatgtcatcgaggatgttatcagcaag
gtccgtgatgagttcatcaacaacggtggtccaggagagagcatcctcaaggaactccaa
gcattatgggaggtgaagatgatgaacgctggggcaatattgggtacgattgaaaggaat
tcagctgctaaagcgacccctggaggtccaataacccctgttcatgaccttaacatgcct
tatgaaggcaatgaggagtatgaaactcccactgcggatatactgtttcctccaactcca
ttgcagactcccttgcctggaacagcacagacaccattacctggaacagtgcagacaccc
ctcccaggaactgctcaaacacctcttcctggaacagctgatagttcaatgtataatatt
cctacaggtggcactccttttacacctagtgattactctcctttgaatgatactggtggt
gcaactgagctcaaagccggtccaggaagacctagcccatttatgcatccgccctcccct
tggttgaatcaaaggcccccccttgatgttaatgttgcttatgttgaaggccgagaagaa
ggtgatcgtggaggttctcagcaacccatgactcaggacttctttatgaattctactggg
aagcggaaaagggaagattttccacctcaatatcataatgggggatacatacctcagcaa
gatggtgctgcagattcaatatatgacaacataaagagtggtgagggcagcaatattcag
cttgagttggtcacggttggtcctgtccaggctcctgcttatagaattcctcaatttgac
ggcccaattcccgactcttatgatgatgcactttctacacccaatatctattatcaaggg
gtggtcaatgaagactataatatagtcaacacaccagcaccaaatgatatgcaagcacct
actcctgctccacttcagaatgatgatattgatgatgatgacgagcccttgaatgaagat
gacgatgatgaattggatgatgtggaccaaggggaggatctaaacacagcacatcttgtt
ttggctcagtttgacaaggtgacacgtacaaagagcaggtggaaatgcactcttaaggat
ggcataatgcacataaataataaagacattcttttcaataaggcaaatggagagtttgac
ttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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