KEGG   Solanum lycopersicum (tomato): 101257622
Entry
101257622         CDS       T02665                                 
Name
(RefSeq) uncharacterized protein LOC101257622
  KO
K12865  polyglutamine-binding protein 1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101257622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101257622
Spliceosome [BR:sly03041]
 Complex B
  Other components
   Prp19 complex
    101257622
SSDB
Motif
Pfam: WW WW_USP8 Hydrolase_2
Other DBs
NCBI-GeneID: 101257622
NCBI-ProteinID: XP_025883920
Position
11:complement(92057..105365)
AA seq 549 aa
MDPYLTCIPIIFVNLTHASKTSVCRWTDSRPDPPLPPGVLSTSYSSPLVPTLNPAGHLPQ
SFQKTRYLAGNGDGNLFPVVASVQPCSESFHTSQHDSSEAILNTLQPRSANDLESAAQNA
VLHEQEISAQKVIQSQREARDASGPKDNSDIFSGRHDPNALKEHLLQMTADHRVQMSLKR
GKSAQPEQGNVEIGNGYGVPGGGAYYSASNTDDSISKTNGGSEHNSGKELPEYLKKKLKA
RGILKDDSKIENHGIAINSSKAQLPKTSDATLPVGWIESRDPTSGALYYYNGSTGKSQWG
RPTEAPAQVSGVCSGLPEYWQEVLDESTGQKYYYNSQTNVSQWEHPSKPQQVAIQHHDGT
VTNNATNVTWVDQASTFQRCIECGGWGVGLVQSWGYCKHCTRVLNLPQSQYVSANVERQQ
QTSGDAGVTEDSEKKFQRQRSSFKPPMSKSNKKDKRKRTNDEDDELDPMDPSSYSDAPRG
GWVVGLKGVQPRAADTTATGPLFQQRPYPSPGAVLRKNAEIASQRKNTKSILTPISKRGD
GSDGLGDAD
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggatccttatctcacttgtatacctataatatttgttaatttaactcatgcttccaag
acttctgtatgcaggtggactgattctcggccagatccgcctcttccacctggggttctt
tctacgtcatattcttcaccacttgtgccaactttgaatcctgctggacatttgccccag
tcctttcagaaaactcgttaccttgctggcaatggcgatggaaatcttttccctgtggtt
gcttctgttcaaccttgctctgaatcttttcatacctctcaacacgactcttctgaggct
atactcaatactttacagccgcgaagtgctaatgatcttgagagcgctgctcagaatgct
gttttgcatgaacaggaaatttctgcacaaaaagtaattcaaagccaaagagaagcaaga
gatgcaagtggacctaaggataattcggatattttctctggtcgtcatgacccaaatgct
ttaaaggagcatttactccaaatgacggcagaccatcgtgtacaaatgtccttaaagcgt
ggaaagtctgcacagcctgagcaaggtaatgtggaaattggaaatggatatggagtgcca
ggtggaggtgcttattacagtgcctcaaataccgatgactcgatctccaagactaatggg
ggttccgaacataattctggtaaagaattacctgaatacctcaagaagaagttgaaggct
cgaggtattcttaaagatgattcaaaaatagagaaccatggcatagcaatcaatagctca
aaggcacaattaccaaagacatcagatgccactttgcctgtgggatggatcgaatccagg
gaccctacaagtggtgctttatattattataatggaagtactgggaaaagtcagtgggga
agacctactgaggctcctgcacaagtttctggggtgtgttcgggacttcctgaatattgg
caggaggttcttgatgaatcaactggtcaaaaatattactataactcacagactaatgta
tcacaatgggaacatccttctaaaccacagcaggttgccattcagcaccatgatggaaca
gtcaccaacaatgcaactaatgtaacttgggttgaccaagcttccacattccagagatgc
attgaatgtgggggatggggtgtggggcttgtacagtcatggggttactgcaaacattgc
actcgagttctcaatcttcctcaaagccagtatgtgtcagcaaatgtggagagacaacaa
caaacttctggggatgcaggtgtcacagaagactctgaaaaaaagtttcagaggcagagg
tctagtttcaaaccaccaatgagtaaaagcaacaaaaaagacaaacggaaacgcacaaat
gatgaggatgatgaattggatcctatggatccaagctcttattcggatgctcctaggggt
ggttgggttgtaggtctcaaaggagtgcaaccacgggcagcagataccactgcaacgggt
cctctctttcagcagcgcccttatccatctcctggagcagtcttgcgtaaaaatgctgaa
attgcttctcaaaggaaaaatactaagtcgattctgacccctatatccaagagaggtgat
ggtagtgatggactgggtgatgctgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (92)   
   KEGG ORTHOLOGY (1)   
   RefGene (87)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (103)   

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