KEGG   Solanum lycopersicum (tomato): 101259348
Entry
101259348         CDS       T02665                                 
Name
(RefSeq) RING-H2 finger protein ATL40
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101259348
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101259348
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    101259348
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-RING_16 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-RING_6 RINGv zinc_ribbon_16 Prok-RING_4 zf-RING-like Prok-RING_1 Baculo_RING SLX1_C zf-C3HC4_4 FANCL_C zf-RING_10
Other DBs
NCBI-GeneID: 101259348
NCBI-ProteinID: XP_004243404
Position
7:61991343..61992428
AA seq 235 aa
MSFDDDDDHPFFHRKNKYDLNSKIMITAIISLSIVIFFVTLLHIYARCVLRRQARRRAEL
QRVSFITSSALHVEPPKTGLDPSVIDSLPVFILKQNDINQNNTIECTVCLSALEDGERVR
NLPNCKHVFHAECIDKWFGSHSTCPICRTEAEPRLLQPGPCEGVVGPTTPSAPPIEGGDS
INVEDCGLTQDAKINGSSSRLSSFRKMISMEKSSRRLQVQFCGVEEGVINDIERQ
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagttttgatgatgatgatgatcatccattttttcatagaaaaaacaaatatgatctt
aatagcaagatcatgataacagccataatttcattatctatagttattttcttcgttact
ctcctccatatttacgcgaggtgcgtcctcagacgccaggctagacgtagggcggagctt
cagcgcgtcagcttcatcaccagctccgccctacatgtcgagccccctaagacggggctt
gacccgtccgtgatagactcgctaccggtatttattctcaaacagaatgatattaatcaa
aataatacaattgagtgcacggtttgtttgagtgctcttgaagatggagaaagggttaga
aatttgcctaattgcaaacatgtgtttcatgctgagtgtattgacaagtggtttgggtca
cactcaacgtgcccgatttgtcggactgaggctgagccccggttgttacaaccggggcca
tgtgagggggtggtaggtcctaccacgccctcagcgccaccaattgagggtggcgattcg
ataaatgtggaagattgtggattgacacaagatgctaaaattaatggatcaagttcgaga
ttaagctcgtttaggaagatgattagcatggaaaaatcatcaagaagattacaagttcaa
ttttgtggtgttgaagagggtgtaattaatgatattgaaagacaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (21)   
   Pfam (21)   
All databases (58)   

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