KEGG   Streptomyces avermitilis: SAVERM_2664
Entry
SAVERM_2664       CDS       T00126                                 
Symbol
mutM1
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sma  Streptomyces avermitilis
Pathway
sma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SAVERM_2664 (mutM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_2664 (mutM1)
Enzymes [BR:sma01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SAVERM_2664 (mutM1)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SAVERM_2664 (mutM1)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SAVERM_2664 (mutM1)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DUF7573 Auto_anti-p27 NFACT_N
Other DBs
NCBI-ProteinID: BAC70375
UniProt: Q82JU0
Position
complement(3267410..3268270)
AA seq 286 aa
MPELPEVEVVRRGLERWVAHRTVADVEVLHPRAVRRHTAGGEDFAHRLKGRRVGVPSRRG
KYLWLPLETTDTAVLAHLGMSGQLLVQPHDCADERHLRIRVRFADALGTELRFVDQRTFG
GLSLHDTTPDGLPDVIAHIARDPLDPLFDDAAFHEALRRKRTTVKRALLDQSLISGVGNI
YADEALWRARIHYERPTAGFTRPRTAELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCATPMRRRPWMNRSSYFCPKCQRAPRVTV
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcccgaattgcccgaggtcgaggttgtacggcgaggcctggagcggtgggtcgcccac
cgcaccgtcgccgatgtcgaggtgctgcacccacgtgccgtacgacgccacaccgcgggc
ggcgaggacttcgcgcaccgcctgaagggccggcgggtcggggtgccgagccgccgcgga
aagtacctctggctcccgttggagacgaccgacacggccgtcctggcgcatctcggaatg
agcggtcagctgctggtgcagccgcacgactgtgccgacgagaggcatctgcgcatccgg
gtgcgcttcgccgacgccctcggcaccgaactccgcttcgtcgaccaacgcaccttcggc
gggctctcgttgcacgacaccacgcccgacggtctgcccgacgtcatcgcgcacatcgcc
cgtgacccgctcgacccgctcttcgacgacgccgccttccacgaggcgctgcgccggaag
cgtacgaccgtcaagcgggccctgctcgaccagtcgttgatcagcggcgtcggcaacatc
tatgcggacgaggcgctgtggcgggcgcgcatccactacgagcgccccacggccggcttc
acgcgcccgcgtacggccgaactcctgggccacgtacgggatgtgatgaacgcggccctc
gccgtcggcggcaccagcttcgacagcctgtacgtcaacgtcaatggcgagtccggctac
ttcgaccgctcactcgacgcctatggacgtgaggggttgccctgccggcgctgtgccacc
ccgatgcggcgacggccgtggatgaacaggtccagctacttctgccccaagtgccagcgg
gcgccgcgcgtcaccgtgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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KEGG   Streptomyces avermitilis: SAVERM_7289
Entry
SAVERM_7289       CDS       T00126                                 
Symbol
mutM2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sma  Streptomyces avermitilis
Pathway
sma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SAVERM_7289 (mutM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_7289 (mutM2)
Enzymes [BR:sma01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SAVERM_7289 (mutM2)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SAVERM_7289 (mutM2)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SAVERM_7289 (mutM2)
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Zn_ribbon_TFIIB NFACT_N Ribosomal_S13 Zn_ribbon_RRN7 Zn_ribbon_8 Prok-RING_1
Other DBs
NCBI-ProteinID: BAC75000
UniProt: Q826A4
Position
8693625..8694485
AA seq 286 aa
MPELPEVEALKDFLADHVVGHEVVRVLPVAISVLKTYDPPVTALEGREITAVRRHGKFLD
LEADGLHFVTHLARGGWLHWRDKLPDAPPRPGKGPLALRVALETGEGFDLTEAGTQKRLA
VHVVRDPGDVPGVARLGPDPLADDFDEARFARLLEGERRRIKGALRDQSLIAGVGNAYSD
EILHAAKMSPFKLTSALTAEEIRQLYAALRTTLTEAVERSRGLAAGRLKAEKKTGLRVHG
RTGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGRPLADRRMSRLLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atgccggaactgcccgaggtcgaagcgctcaaggacttcctggccgaccatgtcgtcggc
cacgaggtcgtgcgggtgctgcccgtcgcgatcagtgtcctgaagacgtacgaccccccg
gtcaccgcccttgagggccgggagatcacggcggtgcgccggcacggcaagttcctcgac
ctggaggcggacggcctgcacttcgtgacgcacctggcccgcggcggctggctccattgg
cgggacaagctgcccgacgccccgccccgccccggcaagggcccgctggcgctgcgtgtc
gcgctggagacgggagagggcttcgacctgacggaggccggcacacagaagagactggcc
gtccatgtcgtacgggacccgggtgacgtcccgggcgtggcccggctcggcccggacccg
ctcgccgacgacttcgacgaggcgcgcttcgcgcggcttctggagggcgagcggcgccgg
atcaagggcgcgctgcgcgaccagagcctgatcgcgggcgtggggaacgcgtacagcgac
gagatcctgcacgccgcgaagatgtcaccgttcaagctcacctcggccctgaccgccgag
gagatacgacagctgtacgcggcactgcgtacgacgctcaccgaggcggtcgagcgctcc
cgggggctggccgccgggcggctgaaggcggagaagaagaccgggctgcgggtgcacggc
agaacgggggagccctgtccggtgtgcggggacacgatccgcgaggtctccttcagcgac
tcctcgctccagtactgcccgacctgccagaccggcggcagacccctggcggaccggcgg
atgtcacggctgctcaagtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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