KEGG   Serratia marcescens SM39: SM39_2493
Entry
SM39_2493         CDS       T03592                                 
Name
(GenBank) type VI secretion system ATPase, ClpV1-like
  KO
K11907  type VI secretion system protein VasG
Organism
smar  Serratia marcescens SM39
Pathway
smar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:smar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SM39_2493
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smar02044]
    SM39_2493
Secretion system [BR:smar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SM39_2493
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 Sigma54_activat AAA_7 AAA_14 AAA_25 Zeta_toxin ATPase_2 NACHT AAA_18 Clp_N TniB DUF6779 T2SSE TSKS DUF815 AAA_24 Hpr_kinase_C CbiA Torsin Apolipoprotein AAA_6 CENPH
Other DBs
NCBI-ProteinID: BAO34495
Position
2546258..2548912
AA seq 884 aa
MSEISRSVLFGKLDSLLFTSLESATAFCKLRGNPYVELAHWLHQLMQSPDGDLQQIVRHF
ALDEAQLARDIVEALDRLPRGASAISDLSEHIDSAVERAWVYGSLKFGAARIRGGHLLLG
ILKTYSLRHLLKAISPQFERINADLLMEQFAAITAHSAENAQDAPAESSAENVSGAARSG
ESVLAQYAQDLTARARNGEIDPVAGRDEEIRQIIDILMRRRQNNPLLTGEAGVGKTAVVE
GLALRIVAGDVPPQLRDVKLCLLDIGMLQAGAGVKGEFEKRLQAVIDEVQSSPTPIILFI
DEIHTLIGAGGAQGTGDAANLLKPALARGQLRTLGATTWSEYKKYIEKDPALTRRFQVVQ
VHEPSEDKALLMLRSTVSPLEQHHRVLLLDEAVDAAVRLSHRYIPARQLPDKAVALLDTA
CARVAVSQHAEPAQVEDCRHRIDALQIELDIARREAKVGIGDPLRPQEIEAQLTALRQEL
EQLTDRWQQELALIQEVITLRAQLHQQEAEPADEETQAGPDADALRAQLGELQQQLSALQ
GEAPLIFAAVDANIVAAVVADWTGIPLGRMVKNEIEAVLQLSDTLNQRVIGQRHALDLIA
RRVRTSRARLDDPNKPVGVFLLAGPSGVGKTETALALAETLYGGEQNVITINMSEFQESH
TVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMED
GEGRHIDFRNTIIILTSNVGTDLIAGLCSDPELLPEPEALSGALRQPLLSVFPAALLGRL
LVVPYYPLTDATLGNIVRLQLGRIQRRLAENHGIVCTFDDAVIEQIVSRCTEVESGGRMV
DAILTNTLLPQISHTLLTGSANDQRYRQLHIALQNNEFICQFQA
NT seq 2655 nt   +upstreamnt  +downstreamnt
atgtctgaaatcagccgctcggtattatttggcaaactggatagcctgttattcacctct
ctggaaagtgcgacggcgttttgcaagctgcgcggtaacccctacgtcgaactggcgcac
tggctgcatcagctgatgcaatcgccggacggcgatctgcagcagatcgtccgccacttc
gcgctggacgaggcgcagctggcgcgcgatatcgtcgaggcgctcgatcgcctgccccgc
ggcgccagcgccatttccgatctgtccgagcacatcgacagcgcggtagaacgcgcctgg
gtctatggctcattgaaattcggcgcggcgcgcatccgcggcggccacctgctgctcggc
atcctgaaaacctacagcctgcgccatctgctgaaggccatttccccgcagttcgagcgc
atcaacgccgatctgttgatggagcagttcgccgccatcaccgctcactcggcggaaaac
gcccaggatgcgccggcggaaagcagcgccgagaacgtatccggcgcggcgcgcagcggt
gaaagcgtgctggcgcagtatgcccaggatctgaccgccagagcgcgcaacggcgagatc
gacccggtggctggccgcgatgaggagatccggcaaatcatcgatatcctgatgcgccgc
cgccagaacaacccgctgctgaccggcgaggccggcgtcgggaaaaccgcggtggtggaa
ggcctggcgctgcgcatcgtggccggcgacgtgccgccgcagctgcgcgacgtgaaactg
tgcctgctggacatcggcatgctgcaggccggcgccggtgtcaaaggcgagtttgaaaaa
cggctgcaggcggtgatcgacgaagtgcagtccagcccgacgccgatcatcctgtttatc
gacgaaattcacaccctgatcggcgccggcggcgcccagggtaccggcgacgccgccaac
ctgctgaaaccggcgctggcgcgcggccaactgcgcaccctcggcgccaccacctggtcg
gaatacaagaaatacatcgagaaggatccggcgctcacccgccgtttccaggtggtccag
gtacacgagccgagcgaagacaaagcgctgctgatgctgcgcagcaccgtcagcccgctg
gagcaacaccaccgcgtgctgctgctggatgaagcggtggacgccgcggtgcggctttcg
catcgctatattcctgcccgccagttgccggacaaggcggtggcgctgctggataccgcc
tgcgcgcgcgtggcggtcagccagcacgccgagcctgctcaggtcgaagactgccgccac
cgcatcgatgcgctgcagatagagttggatattgcccgccgcgaggccaaggtcggcatc
ggcgatcccctgcgcccgcaagagattgaagcccagctgaccgcgctgcgccaggaattg
gaacagctgaccgaccgctggcagcaggagctggcgctgatccaagaggtcatcacactg
cgcgcacagctgcaccaacaggaagcggagcctgccgacgaagagacgcaggctggccct
gacgccgacgcgctgcgtgcccagttgggcgaactgcagcagcagttgagcgcgctgcag
ggcgaagcgccgctgatcttcgccgccgtcgacgccaacatcgtggcggcggtagtggcc
gactggaccggcatcccgctgggccgcatggtgaaaaacgagattgaggcggtgctgcaa
ctctccgacaccctgaaccagcgcgtgatcggccaacgccatgcgctggatctgatcgcc
cgccgggtgcgcacttcgcgggcgcggctggacgatccgaacaagccggtcggggtgttc
ctgctggccgggccgtccggcgtcggcaagactgaaaccgcgctggcgctggcggaaacc
ctgtacggcggcgagcagaacgtcatcaccatcaacatgagcgaattccaggagtcgcac
accgtttcgacgctgaaaggcgcgcccccgggctatgtcggctacggcgaaggcggcgtg
ctgaccgaggcggtgcgccgccgcccttacagcgtggtgctgctggacgaaatcgagaag
gcgcacccggacgtgcatgaaatcttcttccaggtgttcgacaagggctggatggaggac
ggcgaaggccgccatatcgatttccgcaacaccatcatcatcctgacctccaacgtcggc
accgatctgatcgccggactgtgcagcgatccggagctgctgccggagccagaggcgctg
agcggcgcgctgcgccagccgctgctgtcggtgttcccggccgccttgctcggccgcctg
ctggtggtgccgtattacccgctgaccgacgccacgctgggcaacatcgtgcgcctgcag
ctgggccgcatccagcgtcgcctggcggagaatcacggcatcgtctgcaccttcgacgac
gcggtcatcgagcagatcgtcagccgctgcaccgaggtggagtccggcggccgcatggtc
gacgccatcctgaccaacaccctgctgccgcagatcagccacaccctgctgaccggcagc
gccaacgaccagcgctatcgccagctgcatatcgcgctgcagaacaacgaattcatttgt
caatttcaggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (36)   

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