KEGG   Sinorhizobium meliloti 1021: SMc01645
Entry
SMc01645          CDS       T00058                                 
Symbol
prbD
Name
(GenBank) PrbD ABC transporter ATP-binding protein, mediates the uptake of proline betaine at both high and low osmolarities
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
sme  Sinorhizobium meliloti 1021
Pathway
sme02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sme00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SMc01645 (prbD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sme02000]
    SMc01645 (prbD)
Transporters [BR:sme02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    SMc01645 (prbD)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 oligo_HPY AAA_22 RsgA_GTPase AAA_23 AAA_25 nSTAND1 nSTAND3 AAA_16 ATP-synt_ab DUF87 ABC_ATPase Mg_chelatase AAA_15 NB-ARC NACHT Sigma54_activat ATPase MMR_HSR1 AAA_5 sCache_3_2 DUF2813
Other DBs
NCBI-ProteinID: CAC46836
UniProt: Q92NE8
Position
2440335..2441966
AA seq 543 aa
MPELLSVKNLKIEATSYPPGEPPKVVTLVEDVSFDLQKGKVLGLIGESGAGKSTIGLSAL
AYGRGGCRITGGEVLLNGRDILKLGRGGINSVRGRHVCYVAQSAAAAFNPAHKLGDQVIE
ASLRHGIMNRDEATKRALYLFRVLGLPNPETFGDRYPHQVSGGQLQRAMTAMALCPNPEL
IVFDEPTTALDVTTQIDVLAAIKHAIEETDTAALYITHDLAVVAQISDDIMVLRHGKTVE
YGTTKQVIEAPREEYTRALVSVRQAKRDEAPDQTDTLLKIEHVHAGYANGFKVLHDVSMH
LPKGQTLAIVGESGSGKSTLARVITGLLPPSEGRITFEGKELPKALKGRTNDELRRIQMI
YQMADTAMNPRQTVREIVGRPLSFYFGMHGAKKTERVKELLDQIEMGTRFLDRYPAELSG
GQKQRVAIARALAAKPELILCDEPTSALDPLVAEGILNLLLKLQEETAVSYVFITHDIAI
VRAIADSVAVMHRGRLVRFGPKSKVLSPPFDDYTDLLLKSVPEMEIGWLEKVLKTRRMES
AGN
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgcctgagctgctttccgtcaagaacctgaagatcgaagcgacgagctatccgccgggc
gaaccgccgaaagtggtgacgctggtcgaggacgtttccttcgatcttcaaaagggcaag
gtgctgggtctgatcggcgagtccggcgccggcaagtcgacgatcggcctctcggcgctc
gcctatggccgcggcggttgccgcatcaccggcggcgaggtgctgctcaacggccgcgac
atcctgaagctcggccggggcggaatcaattcggttcgtggacgtcatgtctgctacgtg
gcgcaatccgccgccgcagccttcaatcccgcccacaagctcggcgaccaggtgatcgag
gcgtctctgcgccacggcataatgaaccgtgacgaggcgaccaagcgtgcgctctatctc
ttccgggtgctcggccttcccaatccggaaaccttcggagaccgctacccccatcaggta
tcgggcggacagttgcagcgcgccatgaccgccatggcgctctgccccaacccggaactg
atcgtcttcgacgagccgaccacggcgctcgacgtcacgacccagatcgacgtgctcgcc
gcgatcaagcacgcgatcgaggagaccgataccgcggccctctacattacccacgatctt
gcagtcgtcgcccagatctccgacgacatcatggttctgcgccacggcaagaccgtcgag
tacggcaccaccaagcaggtgatcgaggctccgagggaagaatacacccgcgccctcgtc
agcgtccgccaggcgaaacgcgacgaagctccggaccagaccgacacgcttctcaagatc
gaacatgtgcatgccggttacgccaacggcttcaaggtattgcacgacgtctcgatgcac
ctgccgaagggccagacactggcaatcgtcggcgaatcgggctcaggcaaatcgacgctc
gcgcgcgtcatcacgggcctgctgccgccgagcgaagggcgcatcaccttcgaaggaaag
gaactgccgaaggcgctgaaaggcaggacgaacgatgagctgcgccggatccagatgatc
tatcagatggccgacacggcgatgaatccgcgccagacggtgcgcgagatcgtcggccgg
ccgctctccttctacttcggcatgcacggcgccaaaaagaccgagcgggtgaaggaactg
ctggaccagatcgaaatggggacgcgcttcctcgatcgttacccggccgagctctccggc
ggacagaagcagcgcgtcgctatcgcccgggcgctcgccgccaaaccggagctcatcctg
tgcgacgagccgacctcggcgctcgatccgctggtggcggaaggcatcctcaacctgctc
ctgaagctgcaggaggaaaccgcggtttcctatgtcttcatcacccatgacatcgccatc
gtccgggcaatcgccgacagcgtcgccgtcatgcatcgcggccggctggtgcgtttcggc
ccgaaatcgaaggtcctttcgccgcccttcgacgattataccgatcttctcctgaagtcg
gttcccgaaatggaaatcggctggctggaaaaggtgctgaagacgcggcggatggagagc
gccggcaattga

  All links  
Gene (7)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (33)   

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