KEGG   Streptobacillus moniliformis: Smon_0398
Entry
Smon_0398         CDS       T01125                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
smf  Streptobacillus moniliformis
Pathway
smf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Smon_0398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smf03019]
    Smon_0398
   03016 Transfer RNA biogenesis [BR:smf03016]
    Smon_0398
Enzymes [BR:smf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Smon_0398
Messenger RNA biogenesis [BR:smf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Smon_0398
Transfer RNA biogenesis [BR:smf03016]
 Prokaryotic type
  tRNA degradation factors
   Smon_0398
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase SPATA25
Other DBs
NCBI-ProteinID: ACZ00880
UniProt: D1AX54
Position
470212..472410
AA seq 732 aa
MFDKKTYILDVAGKEVKIETGEIARQAGGSVLVTSGGTTVLVTTTRSKEVKEGQDFFPLT
VDYIEKFYATGKFPGGFIKRESKPSTEEVLISRLIDRPIRPLFPEGFFNAVHVVINVVSF
DGINMPEDIATIGVSFALGLSDIPFSGPVAGVTVGYVNGEYIINPDKEQRANMDIYLSVA
GTKSAITMVEAGASEVSEEEMLNAIMLGHEEIKKICEQQETILNSLNITKMEFKGINYDE
RVTTFLNKYQGELKNAILVPGKLEKYEAIDNLCESLLSTFKLEIAKEILSKEKTEEEKLL
ELIGENKEKSVDELVKEFKKYYHDLEKKIVRELIIFDKYRADGRKIDEIRPLNAQIDVLK
MPHGSALFTRGETQALVTATLGSKEDEQIIDGMEGEYNKKFFLHYNFPPFSVGEAGFMRA
PGRRELGHGNLAERALKAVMPLIDDFPYTVRVVSEITESNGSSSQASICGGSLALMAAGV
PIKGTVAGIAMGLIKEAENFTVLTDIQGLEDHLGDMDFKVAGTKKGITAIQMDIKIEGIN
KEIMEIALTQAHKGRMHIIEVMEATIPESRPNLPENAPKIINLKIDPSKIAGLIGPAGKI
IKSIIEETGVKIDVEDDGRVSIFGVDQEKMNRAFELVTQYTLTVELDKVYKGRVTKLAKF
GAFVELVPGTEGLLHISEISHKRIKQVEDVLKVDDIVDVKVIALEDNNKFSLSMKALIEK
EEAKEENSNEGE
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgtttgacaaaaaaacatacattttagatgtagcaggaaaagaagttaaaattgaaaca
ggtgaaattgcaagacaagcaggaggatctgttttagtaactagtggaggaacaacagta
cttgttacaacaacaagaagtaaagaagttaaagaagggcaagatttctttccattaact
gtagattatatagaaaaattttatgctacaggtaaattcccgggtggatttattaaaaga
gaatctaagccatcaacagaggaagttttaatttcaagattaattgatagaccaataaga
cccttatttccagaaggattttttaatgcagtacatgtagtaattaatgtagttagtttt
gatggtataaatatgccagaagatattgctactataggggtatcatttgcattaggttta
tcagatattccatttagtggaccagttgcaggagttactgtaggatatgtaaatggtgaa
tatattattaatccagataaagaacaaagagctaatatggatatttacttatctgttgca
gggactaaaagtgcaataactatggttgaagctggagcaagtgaagtaagtgaagaagaa
atgttaaatgcaataatgttgggacatgaagaaattaaaaaaatatgtgaacaacaagaa
actattttaaatagtttaaatattacaaaaatggaatttaaaggcataaattatgatgaa
agagtaacaacttttttaaataaatatcaaggtgaattaaaaaatgcaattttagtacct
ggaaaattagaaaaatatgaagctatagataatttatgtgaaagtttactttcaacattt
aaattagaaatagcaaaagaaattttatcaaaagaaaaaactgaagaagagaaattatta
gaattaattggagaaaataaggaaaaatctgttgatgaattagttaaagaatttaaaaaa
tattatcatgatttagaaaagaaaatagtaagagaattaataatatttgataaatataga
gcagatggaagaaaaattgatgaaatcagaccattaaatgcacaaattgatgtacttaaa
atgccacatggttcagccttatttactcgtggagaaactcaagctttagttactgcaact
ttaggttctaaagaagatgaacaaattatagatggtatggaaggtgaatataataagaag
tttttcctgcactataatttcccaccattttcagttggagaagcaggatttatgagagca
cctggtagaagagagttagggcatggtaatttagcagaaagagcacttaaggctgtaatg
ccattaatagatgatttcccatatacagttagagttgtatcagaaataactgaatctaat
ggttcatcatctcaagcctctatatgtggtggttctcttgcattaatggcagcaggagtt
cctataaaaggaactgtagcaggtatagctatgggattaattaaagaagcagagaatttc
acagtacttacagatattcaaggattagaagatcatctaggagatatggactttaaagta
gcaggtactaaaaaaggaattacagctatacaaatggatattaaaatagaaggtattaat
aaagaaataatggaaatagcattaactcaagcacataagggaagaatgcatataatagaa
gttatggaagctactataccagaatcaagaccaaatttacctgaaaatgcacctaagata
attaatctaaaaatagatccaagtaaaatagcaggattaataggaccagcaggtaagata
attaaatctatcattgaagaaacaggagttaaaattgatgttgaagatgatggaagagta
tcaatatttggtgtagatcaagaaaaaatgaatagagcatttgaacttgtaacacaatat
acacttacagttgaattagataaggtatataaaggaagagttactaaacttgcaaaattt
ggtgcttttgttgaacttgtacctggtacagaaggattattacatatatctgaaatatca
cataagagaattaaacaagttgaagatgtcttaaaagttgatgacatagttgatgttaaa
gttatagctttagaagataataataaattcagtttaagtatgaaagcattaatagaaaag
gaagaagctaaagaagaaaattcaaatgaaggagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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