KEGG   Stenotrophomonas maltophilia K279a: Smlt0605
Entry
Smlt0605          CDS       T00718                                 
Symbol
rhlE1
Name
(GenBank) putative ATP-dependent RNA helicase 1
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
sml  Stenotrophomonas maltophilia K279a
Pathway
sml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Smlt0605 (rhlE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sml03019]
    Smlt0605 (rhlE1)
Enzymes [BR:sml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Smlt0605 (rhlE1)
Messenger RNA biogenesis [BR:sml03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Smlt0605 (rhlE1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII HEM4 P-loop_SecA AAA_19 AAA_22
Other DBs
NCBI-ProteinID: CAQ44191
UniProt: B2FLT7
Position
complement(618406..619818)
AA seq 470 aa
MSFESLGLAPFLLRALAEQGYENPTPIQQQAIPLALAGRDLLAGAQTGTGKTAAFGLPLL
QHLGTASQEVRSGPRKPRALILAPTRELATQVHDSLRGYSKYLRIPSACIYGGVGMGNQL
DILRRGVDLLVACPGRLIDHLERRSIDLSGIELLVLDEADRMLDMGFLPSIKRILAKLPK
QNRQTLLFSATFEDNIRQLALEFMRNPEQIQVTPKNTVAETITHRVHPVDAGRKRDLLLH
LLAQDSREQTLVFARTKHGSDKLATFLEKSGIKTAAIHGNKSQGQRLRALGDFKAGRVTV
LVATDIAARGIDINELPKVINFDLPMVAEDYVHRIGRTGRNGATGQAISLVAQDEVKLLR
AIVRLLGRDMDIRDVPGFELQVPIRWGNSAPGKAEHDTGERAPRKSHARRPHGDAPRHAH
AGPKKAGGGRREGGGNGQQRAGAGQGQRRGGGGNGGGRGRGQGGGGGRAG
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtcttttgaatcgctgggcctggcgcccttcctgctgcgtgcgcttgccgagcagggc
tacgaaaacccgaccccgatccagcagcaggcgatcccgctggcactggccggtcgtgac
ctgctggccggcgcacagaccggcaccggcaagaccgccgccttcggcctgccgctgctg
cagcacctgggcaccgcctcgcaggaagtgcgcagcggcccgcgcaagccgcgcgcgctg
atcctggccccgacccgcgaactggccacccaggtgcacgacagcctgcgcggctacagc
aagtacctgcgcattcccagcgcctgtatctacggcggcgtcggcatgggcaaccagctg
gacatcctgcgccgcggtgtggacctgctggtggcctgcccgggccgcctgatcgaccac
ctggagcgtcgcagcatcgacctgtccggcattgaactgctggtgctggacgaagccgac
cgcatgctcgacatgggcttcctgccgtcgatcaagcgcatcctggccaagctgccgaag
cagaaccgccagaccctgctgttctcggccaccttcgaggacaacatccgccagttggcg
ctggagttcatgcgcaacccggaacagatccaggtgacgccgaagaacaccgtggccgaa
accatcacccaccgcgtgcatccggtcgacgccggccgcaagcgcgacctgctgctgcac
ctgctggcgcaggacagccgcgagcagaccctggtgttcgcccgcaccaagcatggcagc
gacaagctggccaccttcctggaaaagtcgggcatcaagacggcggcgatccacggcaac
aagagccagggccagcgcctgcgtgcgctgggcgacttcaaggccggccgcgtgaccgtg
ctggtggccaccgacatcgccgcgcgcggcatcgacatcaacgagctgccgaaggtgatc
aacttcgacctgccgatggtggccgaggactacgtgcaccgcatcggccgcaccggccgc
aacggcgcgaccggccaggcgatttcgctggtggcgcaggatgaagtgaagctgctgcgc
gcgattgtgcgcctgctgggccgcgacatggacatccgcgatgtaccgggcttcgagctg
caggtgccgatccgctggggcaacagtgcaccgggcaaggccgagcacgatactggcgag
cgcgcaccgcgcaagagccatgcgcgccgtccgcacggtgatgcgccgcgccacgcgcac
gcaggcccgaagaaggccggcggtggccgtcgcgaaggcggtggcaatggccagcagcgt
gcaggtgccggccagggccagcgccgtggtggtggcggcaatggtggcggccgcggtcgt
ggccagggtggcggcggtggtcgcgccggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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