KEGG   Selaginella moellendorffii: SELMODRAFT_114371
Entry
SELMODRAFT_114371 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K08736  DNA mismatch repair protein MSH3
Organism
smo  Selaginella moellendorffii
Pathway
smo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SELMODRAFT_114371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_114371
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     SELMODRAFT_114371
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV
Other DBs
NCBI-GeneID: 9647215
NCBI-ProteinID: XP_002981372
JGI: 114371
UniProt: D8SD53
Position
Unknown
AA seq 696 aa
MCVVEEAITEHKANAGKDEVRGSFDARFGVVAVETSTGDVMYGHFLDTVTRTELESRLLA
CAPAELLLSASLSASTKKLLMDYAGAADVRVEKTPENSFENGGTVAALADFYGSLASSKK
GCLDEKVDAGLEVIFYLQALMTMPEIVVAAFAHIFAYLKQFNLENVLRLGALFRPFAGQQ
EMTLSPNTIRQLEILHNQTDGTENGYLFWLMNHTKTAFGARLLKYWVTHPLRDRMLISQR
LDAVAEIAESIGDKGRGTTVATLASTLLLLGKLPDLERGITRIYHKTATTYEFINVINAI
MKAASQFQRVRDARSALLSRLISAVTSTSVIDHANKLVTSLNAEAAAAGDKINLFVAGQF
PEVYECKETIKSIEKDLESFLPSYRELLKCSNLEYLSVSGTSFLVEVLSFSQFNWVKINS
TKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALAALDC
LYSLAVVSCNQGYVRPEFVDEACLLKIGHPVLDSTLQDAFVPNDTVVSGEGERSQIITGP
KMGGKSCYIGQVALITIMSQIGLYVPAATAKLHVFDAVFTRMGAMDRIQRGSSTFFEELS
EASTILHKATSRSLVVIDELGRGTSTHDGITIAYAMLHHLLQEVHTHYLNVTEVVKLFPS
QVQAYHMSYLVESLEGDLDKSSVQEVVQKVTFLYKL
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgtgtgttgtggaggaggcaatcaccgagcacaaggccaacgctggaaaggatgaagtg
aggggaagttttgatgctagatttggggtggtggccgtggaaacctcgaccggagacgtg
atgtatggccactttctggacactgtcaccaggacggaactggaatcacggttgcttgcg
tgtgctcccgcagaacttcttttatctgcgtccttgtccgcttctacaaagaagttgttg
atggactatgcaggcgcagcggatgttcgagtcgagaagacgcctgagaactcgtttgaa
aatggcggtactgttgctgctcttgcggacttctacgggagcttggcgtcttctaagaaa
ggctgtctggacgagaaggttgatgcagggttagaggtaattttctatttgcaggcgttg
atgacgatgccagaaatcgtggttgctgcgtttgcgcatatatttgcttatctgaagcag
tttaacctggaaaatgtactgcgcttgggagctcttttccgaccatttgccgggcagcaa
gagatgacgctctcgcccaataccatccgccagcttgagattctacataaccaaactgat
ggtactgaaaacggatatttattctggcttatgaatcacacaaaaactgcttttggcgcg
aggctgcttaagtattgggtgacccatccgttaagagaccgcatgcttatttctcaacgt
ttagacgccgttgcggaaattgccgaatccattggagataaaggcagaggtacaacagtt
gcaactttagcttcaacgttgttgctgctgggaaaattgcctgatcttgagcgtggtatc
acaagaatttatcacaaaacagcaacaacgtatgagttcattaacgtgattaatgcgatt
atgaaagcagcgtcccagtttcaacgggttcgcgacgccaggtctgcgctcctcagcagg
ctaatctccgcagtgacttcaacttcagtgatagatcacgcaaacaagcttgtgacaagt
ttgaatgcagaggcagcagctgccggggataagattaacttgtttgttgccggccagttt
cccgaggtttacgaatgcaaagagaccataaaaagtattgagaaggatctcgaaagtttt
cttcccagttatcgggaactgttgaagtgttcaaatctggaatacttgagcgtctcggga
acgtcgtttttggtcgaggtactttctttttctcaattcaattgggttaaaataaacagt
acgaaaaaggcaaaccgctatcatcctccggaggtcttggaagcatcggaaagaatggca
cttgcaaaggagcaattaaatatatcttgcgccaaagcatgggacatgttcctgactgac
tttacctcctatcacatggagttccgggctgcagtacaggcactagcagctctcgactgt
ctttattcccttgctgttgtctcgtgcaatcaggggtatgttcgaccggagttcgtggat
gaagcgtgccttttgaagataggacatccggtcctagattcgactctgcaagatgcattt
gtaccaaatgacacagttgtttctggtgagggtgaacgatcgcaaataatcactggtcca
aaaatgggtggtaaaagttgctacatcggtcaagttgctctaatcacaatcatgtcccag
ataggattgtatgttccagccgcgacagccaaactgcatgtattcgatgccgtgtttacg
agaatgggggcgatggacagaatccagaggggctccagtacgtttttcgaggagctgagt
gaagcttcaactattctccacaaggcaacttctcgctcgctggtagtcatcgacgagctg
ggaagaggaaccagcacgcacgacggcatcaccatcgcgtatgcgatgctccatcacctt
ctccaagaggttcatactcactacttgaacgtcacggaggtggtgaagctctttcccagc
caggttcaagcataccatatgtcatatcttgtggagagcctggaaggagaccttgacaaa
agctccgtgcaagaagtggtacaaaaggtgacgttcctctacaagctctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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