KEGG   Streptomyces nigra: DC008_08040
Entry
DC008_08040       CDS       T05839                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
snz  Streptomyces nigra
Pathway
snz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:snz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DC008_08040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snz03400]
    DC008_08040
DNA repair and recombination proteins [BR:snz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DC008_08040
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DC008_08040
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_21 RsgA_GTPase AAA_16 nSTAND1 AAA_33 AAA_22 APS_kinase DnaJ_CXXCXGXG ExoX-like_C NACHT Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AWE54501
UniProt: A0A2S1IPF7
Position
complement(1724309..1727347)
AA seq 1012 aa
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPITRQSPQAIVDRVLELPEGSRFQVLSPLVRERKGEFVDLFSDLQTKGYSRARV
DGETIQLSSPPTLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMFSEHLYCPYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPELIVP
DEDKSLDEGAIHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPQRAKKALLYGHKTQ
IEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDASRERFEGYMREVPCPSCQGTRLK
PIVLAVTVMGKSIAEVSAMSISDCADFLGELKLSARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGKVVHSGSLKELLANDESQTGQYLAGK
KAIPLPDIRRPLDPSRQLTVHGARENNLQDIDVSFPLGVFTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRKLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLNMPIEEAMDFFEAVPAINRHLKTLNDVGLGYVRLGQAATTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLLKVLSGLVDKGNTVIVIEHNLDVIK
TADWLVDMGPEGGAGGGLVVAEGTPEEVAAVPASHTGKFLREILDADRISDAASVKAPRK
TARKTVAADSATRRTATARTADKATGTAKKTAAKKASSASTAKKTTRARKSS
NT seq 3039 nt   +upstreamnt  +downstreamnt
gtggccgaccgtctcatcgtccgtggcgcgcgcgagcacaacctgaagaatgtctcgctc
gacctgccgcgcgactcgctcatcgtcttcacgggcctgtcggggtcgggcaagtcctcg
ctggccttcgacaccatcttcgccgaggggcagcgacgctacgtcgagtcgctgtcgtcc
tacgcccggcagttcctcgggcagatggacaagccggacgtcgacttcatcgagggtctg
tccccggcggtctccatcgaccagaagtcgacctcgcgcaacccgcgctccacggtcggc
accatcaccgaggtctacgactacctgcgtctgctcttcgcgcgcatcggcaagccgcac
tgtcccgagtgcggccgccccatcacgcgccagtcgccgcaggccatcgtcgaccgggtc
ctggagctgccggagggcagccgcttccaggtcctgtcgccgctcgtccgcgagcgcaag
ggcgagttcgtcgacctcttctccgacctgcagaccaagggctactcacgcgcacgcgtg
gacggcgagacgatccagctgtccagcccgcccacgctgaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcacggtgaaggactccgccaagcgccgcctcaccgac
tccgtcgagaccgccctcggcctgtccggcggcatggtcgtgctcgacttcgtcgacctt
cccgaggacgaccccgagcgcgagcgcatgttctcggagcacctgtactgcccgtacgac
gacctctccttcgaggagctggagccccgctccttctccttcaactcgccgttcggcgcc
tgccccgagtgcacgggcatcggcacgcgcatggaggtcgaccccgagctgatcgtcccc
gacgaggacaagtccctcgacgagggcgccatccacccctggtcgcacgggcacaccaag
gactacttcggccggctgatcggcgccctcgcggacgccctcggcttccggacggacatc
ccgttcgccggtctgccgcagcgcgccaagaaggccctgctgtacggccacaagacgcag
atcgaggtgcggtaccgcaaccggtacggccgcgagcgcgtctacacgacgccgttcgaa
ggcgccgtccccttcgtgaagcgccggcacagcgaggcggagagcgacgcgagccgtgag
cgcttcgaggggtatatgcgcgaggtgccgtgcccctcgtgccagggcacccggctgaag
ccgatcgtcctcgccgtcacggtcatggggaagtccatcgccgaggtctccgccatgtcc
atcagcgactgcgcggacttcctcggtgagctgaagctgagcgcccgcgacaagaagatc
gccgagcgcgtgctgaaggaggtcaacgagcggctgcggttcctggtcgacgtcggcctg
gactacctctcgctcaaccgcgcggccggcaccctgtccggcggcgaggcccagcgcatc
cggctcgccacccagatcggttccggactcgtcggcgtcctctacgtcctcgacgagccg
tccatcggtctgcaccagcgggacaaccaccggctgatcgagaccctggtccgcctgcgc
gacatgggcaacaccctcatcgtcgtcgagcacgacgaggacaccatcaaggtcgccgac
tggatcgtcgacatcggccccggcgccggtgagcacggcgggaaggtcgtccacagcggc
tccctgaaggagctgctcgccaacgacgagtcgcagaccggccagtacctggcgggcaag
aaggccatcccgctgcccgacatccggcgcccgctggacccgtcccggcagctcacggtc
cacggtgcccgggagaacaacctccaggacatcgacgtctccttcccgctcggcgtcttc
accgcggtgaccggcgtctccggctcgggcaagtcgaccctggtcaacgacatcctgtac
acgcacctggcccgcgagctgaacggcgcccgcagcgtccccgggcggcacacgcgcgtg
gacggcgacgacctggtcgacaaggtcgtgcacgtcgaccagtcgcccatcggccgtacg
ccgcggtcgaacccggcgacgtacaccggcgtcttcgaccacatccgcaagctgttcgcc
gagaccaccgaggcgaaggtccgcggctatctgcccggccgcttctccttcaacgtcaag
ggcggtcgctgcgagaactgcgcgggcgacggcacgatcaagatcgagatgaacttcctc
ccggacgtctacgtcccgtgcgaggtctgccacggcgcccggtacaaccgggagaccctg
gaggtccactacaagggcaagtccatcgccgaggtcctgaacatgccgatcgaggaggcc
atggacttcttcgaggccgtcccggcgatcaaccggcacctcaagacgctcaacgacgtc
ggcctcggctacgtccggctcggccaggcggcgaccacgctgtccggcggtgaggcgcag
cgcgtgaagctcgccagcgagctccagaagcgctccaccggccgcacggtctacgtcctc
gacgagccgaccaccggtctgcacttcgaggacatcagcaagctgctgaaggtcctgtcg
ggcctggtcgacaagggcaacacggtcatcgtcatcgagcacaacctggacgtgatcaag
acggccgactggctcgtcgacatgggccccgagggcggcgccggaggcggtctcgtcgtc
gccgagggcacgcccgaggaggtcgccgcggtccccgccagccacaccggcaagttcctg
cgcgagatcctcgacgccgaccggatcagcgacgcggcctcggtgaaggccccgcgcaag
acggcccggaagaccgtcgcggccgactcggcgacgcgcaggacggcgacggcccgtact
gccgacaaggccaccggcaccgcgaagaagacggcggcgaagaaggcgtcgtccgcgagc
accgcgaagaagacgacgcgggcacgcaagtcgtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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