KEGG   Sporosarcina pasteurii: E2C16_04975
Entry
E2C16_04975       CDS       T06007                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
spae  Sporosarcina pasteurii
Pathway
spae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    E2C16_04975 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spae03400]
    E2C16_04975 (ruvB)
Enzymes [BR:spae01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E2C16_04975 (ruvB)
DNA repair and recombination proteins [BR:spae03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     E2C16_04975 (ruvB)
    RecFOR pathway proteins
     E2C16_04975 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase nSTAND3 AAA_14 NB-ARC AAA_22 Sigma54_activat AAA_3 RNA_helicase AAA_25 AAA_18 NTPase_1 TsaE AAA_24 MCM Sigma54_activ_2 Bac_DnaA NACHT AAA_17 DUF815 Parvo_NS1 AAA_19 AAA_28 IstB_IS21 Rad17 AAA_33 ATPase_2 AAA_7 AAA_11
Other DBs
NCBI-ProteinID: QBQ05063
Position
1023211..1024221
AA seq 336 aa
MEERVISGETTDFDLGFEQSLRPEFLNQYIGQIQVKDNLSIFIEAARRRSESLDHVLLYG
PPGLGKTTLASVIANEMNVNLRTTSGPAIERPGDLAAVVSSLEPGDVLFIDEIHRLNRAI
EEVLYPAMEDFCLDIVVGKGPSARSVRLDLPPFTLIGATTRAGSLSAPLRDRFGVPLRLE
YYEVEPLTEIILRSADVFDVSIEPTAATELAKRSRGTPRIANRLLRRVRDYAQVRGDGKI
SFQTAQEALEMLQVDSHGLDHIDHKLITGMIEQFRGGPVGIDTIAASIGEESVTIEDVYE
PYLLQIGFLQRTPRGRVVTNYAYEHFGYPLPGDAHH
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggaggaacgtgtgatttcaggggaaacgaccgactttgatttaggttttgaacaatcg
cttcgaccagaatttttaaatcaatatatcggacagattcaagtaaaagataacctaagt
atttttatcgaggcagctagaagacgaagcgagagtttagaccatgttttactttacggg
cctccaggtcttgggaaaacgacgttggctagtgtcattgcaaatgaaatgaacgtcaat
ctccgtacaacgagtggacctgcaattgagcgacctggagatttagcagcagttgtttcc
tcgttagagccgggggatgtgttatttattgatgagatacacagactgaaccgggcaatt
gaggaagttctttatccagcgatggaagatttttgtctcgatattgtagttggaaaaggg
ccttcagcacgctcagtgcgtctagatttgcctccttttacactgattggtgcaacaaca
cgcgcaggttctttatcggcgccattacgtgaccggtttggcgtaccgttacggttggaa
tattatgaagtagaaccattaacagaaattattcttcgaagtgcagatgtgtttgacgtc
tctatagaaccaactgcggcaactgagctcgcgaagcggtctcgtggcacaccacgtatt
gcgaatcgacttctccgaagggtaagggattatgcgcaagtgcgtggagacggaaaaatc
tcttttcaaactgcgcaagaagcattggaaatgttgcaagtagactcacatggactggat
catatcgatcataagttaattacgggtatgattgaacaatttagaggagggcctgttgga
attgatacgattgcagcaagtattggtgaagaatcggtgacgattgaagatgtatatgaa
ccttacttattgcaaattggttttcttcaacggactccacgtggtagagttgtaacgaat
tatgcatatgagcattttggttatccattaccgggagatgctcatcattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (35)   
   Pfam (35)   
All databases (43)   

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