KEGG   Solanum pennellii: 107015061
Entry
107015061         CDS       T04130                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107015061
   03009 Ribosome biogenesis [BR:spen03009]
    107015061
Enzymes [BR:spen01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107015061
Spliceosome [BR:spen03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    107015061
Ribosome biogenesis [BR:spen03009]
 Eukaryotic type
  90S particles
   Helicases
    107015061
  Pre-60S particles
    107015061
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 DUF4604 FancD2 Pox_Ag35 AAA_22 DUF4746 FAM176 GAGA_bind CDC45 GLTP
Other DBs
NCBI-GeneID: 107015061
NCBI-ProteinID: XP_015070711
Position
3:complement(68711047..68718264)
AA seq 611 aa
MFRILAKTLLPPLNHLLLLLRQTLSFSFSDDINLHPPPLSYKFSTMAEVEENPSIVVAEE
ESIKKKRKRKRDKKNKMVTEKETKEEEEKEEGEEDDEERQEFDDELKEEIKKEMKSGSGI
MSSELFSSVQISELTRKAIKDMGFEYMTQIQARAIPPLVEGKDVLGAARTGSGKTLAFLV
PAVELLFNVHFTPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRAEA
ERIAKGANLLVGTPGRLLDHLRNTKGFNYKNLQCLVIDEADRILEANFEEDMQQILKLLP
KEGRQTALFSATQTKKVEDLARLSLTAPIYIDVDDGRRRVTNEGLQQGYCVVPSARRFIL
LYSFLKRNLSKKIMVFFSSCNSVKFHSELLRYIKIECHDIHGKQKQQKRTSTFFDFCEAK
KGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGAKGNALLFLIPEEL
QFLKYLKAAKVPVKEYEFDHKKLANVQSLLEKLVANNYYLNQSAKEAYRSYLLSYNSHSM
KEIFNVHRLDLQAVASSFCFSNPPKVHLNIDSNASKFRQKKRKVEGSRNGFSEGNPYGKK
RADDTRQFVRY
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgtttagaatcctcgccaaaaccctcctccctccgctaaatcatcttcttcttcttctc
cggcaaactctcagtttctctttctccgacgatatcaacttgcacccgccgccgctgagt
tataaattctcaaccatggcggaggttgaagagaaccctagtatagttgttgcggaagaa
gagtcaattaagaagaagagaaagcgaaagagagacaagaagaacaaaatggttacggaa
aaggagactaaggaggaggaagagaaagaggaaggggaagaggatgatgaagaaagacag
gaatttgatgatgaactgaaggaggagattaagaaagagatgaagagtgggtcaggtatt
atgagttcagagttgttttcttctgttcaaatttctgagctcaccaggaaagctattaag
gatatgggatttgagtacatgactcagatccaagctagggcaattcctcctcttgtggaa
ggcaaggatgtcctcggagctgcaagaactggttctggtaaaactctagcatttttggtt
ccagctgtggagttattatttaatgtccactttacaccacgtaatggaactggggtggtt
gttatttgcccaacaagagaactggctatacagacacatgctgtggcaaaggaccttctc
aagtatcactcgcagactcttgggttagttatcggtggttcagcaagaagagcagaggca
gagcgtattgctaaaggggctaatctcttagtaggcacccctggtcgactacttgatcat
cttagaaataccaagggtttcaattataagaaccttcagtgtctcgtgattgatgaagct
gataggattttggaagcaaactttgaggaagatatgcaacaaatacttaaacttctacca
aaggaggggaggcagactgctctcttttcggccacacagacaaaaaaggttgaggacctt
gcacgcttatctttgacagctcctatctatattgatgtggacgatgggagaaggagggtc
acaaatgaagggctacaacaaggatactgtgttgtcccaagtgccaggagatttattctc
ctttattcattcttgaagaggaacctgtcaaagaaaataatggttttcttctcatcttgc
aactctgtcaagttccattccgaacttcttcgctatatcaagattgagtgccatgatatt
catgggaagcaaaagcagcaaaaacgaacgtctaccttttttgatttctgcgaagcaaag
aagggcatcctgttatgcacagatgtcgctgcacgtggtctggatattcctgctgtggac
tggattgtgcagtttgacccccccgatgaacccaaggaatacatacacagagttggtcga
acagcacgtggtgaaggtgctaaaggaaacgctttgctattcttgattccagaggagttg
cagtttctcaagtacctgaaggcggcaaaagtacctgtaaaagaatacgaatttgatcat
aagaagctggccaatgtgcagtcactcctggaaaaattggttgcaaacaactattacttg
aaccagtcggctaaagaggcatataggtcttatttactatcatataattctcattccatg
aaggaaatattcaatgttcacagacttgatctgcaggctgtagcttcttcgttctgtttt
tctaatcctccaaaagtgcacctcaacatagatagcaacgcttccaagttcaggcagaaa
aagcgtaaagttgaaggaagccgaaatgggttcagcgagggcaacccttatgggaagaaa
agagctgacgatacgaggcagtttgtaagatattag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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