KEGG   Sphingobium sp. RAC03: BSY17_329
Entry
BSY17_329         CDS       T04461                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
sphr  Sphingobium sp. RAC03
Pathway
sphr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sphr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSY17_329 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphr03019]
    BSY17_329 (pnp)
   03016 Transfer RNA biogenesis [BR:sphr03016]
    BSY17_329 (pnp)
Enzymes [BR:sphr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BSY17_329 (pnp)
Messenger RNA biogenesis [BR:sphr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BSY17_329 (pnp)
Transfer RNA biogenesis [BR:sphr03016]
 Prokaryotic type
  tRNA degradation factors
   BSY17_329 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 BioW S1_2 Fucose_iso_N1 GA-like
Other DBs
NCBI-ProteinID: AOF95640
UniProt: A0A1B3MRB2
Position
complement(337771..340110)
AA seq 779 aa
MFDVKKVSIELAGKTLTLETGRIARQADAAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPLRPLFPEGFYNEINVIAQVLSF
DGESEPDMVAMIAASAALTLSGVPFMGPIGAARVGYKDGEYQLNPSLDEVKTGELDLVVA
ATYDAVMMVESEAKELSEEVMLGAVLFAHDASKKIVDAIISLAEKAAKDPWDMAKSDDLG
DLKAKLKKLIGKDITAAYKLTDKSARSNALNEARAKAKAQLAADGLDAQTVMAGIKLTKK
LEAEIVRGAILKDGKRIDGRTTTQIRPIEAMVGFLPRTHGSALFTRGETQSICTTTLGTK
DAEQMIDGLTGLHYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPSKD
EFPYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKNFAVLS
DILGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITREIFEAALHQAKEGRAHILGEMAK
ALDSTRSELSAHAPRIETLQIDKSKIREVIGTGGKVIREIVAETGAKVDIDDEGLIKISS
SDPAQIEAARKWILGITQEAEIGKIYDGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERV
EKPTDVVSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGEELEDTRPAREAREPRAGGEGR
GDRGRGPRRDGGGGRGGERGEGRGDRGPRRDRGPRDDAAKDDGKDDGSNAGLPDFLTQD
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtttgacgtcaagaaagtatcgatcgagctggccggcaagacgctgaccctcgaaacc
ggccgcatcgcgcgccaggctgacgccgccgtgctggcgacctatggcgaaaccgtggtg
ctgtgcgccgtgaccgccgccaagagcgtgaaggaaggccaggactttttcccgctgacc
gttcactatcaggaaaaatattccgccgccggccgcatccccggtggcttcttcaagcgt
gagcgcggtgcgaccgaaaaggaaacgctggtttcccgcctgatcgaccgtccgctccgt
ccgctgttccccgaaggcttctacaacgaaatcaacgtcatcgcccaggtgctgtcgttc
gatggcgaaagcgagccggacatggtggcgatgattgccgcgtcggctgccctgaccctg
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggttacaaggatggcgaa
tatcagctcaacccgtcgctggacgaagtgaagaccggcgaactcgacctggtcgtcgcc
gccacctacgacgcggtgatgatggtcgaatccgaagccaaggaactgtcggaagaggtc
atgctgggcgccgtcctgttcgcgcatgatgcgagcaagaagatcgtcgacgccatcatc
agcctcgctgaaaaggccgccaaggatccttgggacatggccaagagcgatgatctgggc
gacctgaaggccaagctcaagaagctgatcggcaaggacatcaccgctgcctacaagctg
accgacaagtcggcccgctcgaacgcgctgaacgaagcccgcgccaaggcgaaggcccag
ttggccgctgacggcctggacgcccagaccgtgatggccggcatcaagctgaccaagaag
ctggaagcggaaatcgtgcgcggcgccatcctcaaggacggcaagcgtatcgacggccgc
accaccacgcagatccgcccgatcgaagcgatggtcggcttcctgccccgcacccatggt
tcggccctgttcacgcgcggcgaaacccagtcgatctgcaccacgacgctgggcaccaag
gacgccgagcagatgatcgacggcctcactggcctgcattatgagaacttcatgctgcac
tataacttcccgccctattcggtcggtgaagtcggtcgcttcggcgcgccgggtcgtcgc
gaagtgggtcatggcaagctcgcatggcgtgcgctgcaccccgttctgccgagcaaggac
gagttcccctatacgatccgcgttctgtccgacattaccgaatcgaacggttcctcctcg
atggcgaccgtctgcggtggttcgctctcgatgatggacgccggtgtgcccttgaagcgc
cccgtatccggcatcgccatgggcctgatcctggaaggcaagaattttgccgtcctgtcc
gacattctgggtgacgaagatcatctcggcgacatggacttcaaggtggccggcacgtcc
gaaggcatcaccacgatgcagatggacatcaagattgcgggcatcacccgcgaaatcttc
gaagccgctctgcatcaggccaaggaaggccgcgcgcacatcctgggcgaaatggccaag
gcgctcgacagcacgcgcagcgaattgtcggcccatgccccgcgcatcgagacgttgcag
atcgacaagtcgaagatccgcgaagtcatcggcaccggcggcaaggtcatccgtgagatc
gtcgccgaaaccggcgcgaaggtcgacatcgatgacgaaggcctgatcaagatcagctcg
tccgatccggcgcagatcgaggccgcgcgcaagtggatcctcggcatcacgcaggaagcg
gaaatcggcaagatctatgacggcaaggtcgtcaacatcgtcgacttcggtgctttcgtg
aacttcatgggtggcaaggacggtctcgtccacgtctccgaaatgaagaatgagcgcgtc
gaaaagccgaccgacgtcgtgtcggaaggccaggaagtgaaggtcaaggttctcgaaatc
gatccgcgtggcaaggttcgcctgtcgatgcgcgtcgtcgatcaggaaaccggcgaagaa
ctggaggacacccgtcctgcccgtgaagcgcgcgaaccccgcgccggtggcgaaggccgt
ggcgatcgtggccgtggcccgcgtcgtgacggcggcggtggccgtggtggcgaacgtggt
gaaggccgtggcgaccgtggcccccgccgcgaccgtggcccgcgcgacgacgctgccaag
gacgacggcaaggatgatggctcgaacgccggcctgcccgacttcctgacccaggactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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