KEGG   Sphingobium sp. TKS: K426_19410
Entry
K426_19410        CDS       T04965                                 
Name
(GenBank) type IV secretory pathway VirB4 component
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
spht  Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:spht00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spht02044]
    K426_19410
Secretion system [BR:spht02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   K426_19410
SSDB
Motif
Pfam: TraC_F_IV P-loop_TraG AAA_10 AAA_22 DUF87 RedAm-like_C AAA_16 TraG-D_C
Other DBs
NCBI-ProteinID: AMK24811
UniProt: A0A126RRB3
Position
1:complement(3919715..3922231)
AA seq 838 aa
MTSYQSGMTLARLRRSVERDSYSDFLPLAAWVEEEQAFLTIDDGWGYSWELIPSPYMFAH
VHEALLGLLNVNFPEGTILQLQSFADPLIDDALDAFLDLKTRPDPLIQASARRTFDYLRA
GTMGLKALHGIPIRDFRAFLSVKTRAPMDSDLRRQIEEQLAKLGIRPMAPSEIISLYRRI
FNGVHAPAPGVFTQTADVPLRRQIIDAGPALRFDGPEVYLGNQVARCLTPKSPPRRITAE
RANRLTGGMRGSSEDSDQIGGPFLYTLNVLFDHSAFEIHKRAQILSAQKAAGSFAVEVGK
QIEEIGWILDEAGNTRFVSVIPTMWVFGRDRHQAREMAARAKRLWESEPLPWMVQEESYL
NPILLAASLPFGLYPERRTIGMLQRDFRVPVRAGVLMSPIQTDFRGGGRPALLYTGRKGQ
LITLDLFDPRINNYNFIVSAESGAGKSFLLNNLCQQYFAQNALIRIIDIGGSYKKLCTLC
SGRYIDLGEEHLVLNPFDLGLALDGDDRESAISMAVSIVAEMANAGTRKGVTTSEWNLLK
SAVQWAIESGRAEAGIDAVREWLGSYPANTVSDLDRVDHLVPTARELAFNLRDFGSDGAY
GHYFNGPSTFDISNDEFVVLELERLKAMPDLFNVVVMVVINAVTQELYLSARDRPRFVLC
DEAAQFMTREEGQDLSRLAEAISQGYRRARKYRGSFGIILQSMNDLLLFGGTGQVILENA
ATRFLLQGSTYDKAVENKILDYSGFVLDLLKSVRNNKPNYSEVFIDSPLGLGIARLVVDP
FSYWINTSAPEDVAAFEALVRAGRSPLEAVCDLAGVDPAGIIGTSFDDAAPLKRSALS
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgaccagctatcaatcgggcatgacgctggcgcggctgcgccgcagcgtcgagcgcgac
agctattccgattttcttccgctcgccgcctgggtcgaggaagaacaggccttcctcacc
atcgacgatggctggggctatagctgggagctgatcccctccccctacatgttcgcccat
gtccatgaggcgctgctggggctgctcaacgtcaattttcccgaaggcacgatcctccag
ctccagagtttcgccgacccgctgatcgacgatgcgctcgacgcctttctcgacctcaag
acacggcccgatccgctcatccaggcctcggcccggcgcaccttcgactatctgcgcgcc
ggcaccatgggcttgaaggccctgcatggcatcccgatccgcgatttccgcgcattcctg
tcggtcaagacgcgcgcgccgatggacagcgacctgcgccgccagatcgaggagcagctc
gccaagctcggcatccgcccgatggcgccgagcgagatcatctcgctctaccggcgcatt
ttcaacggcgttcatgcgcccgcgcccggcgtcttcacccagaccgccgacgtgccgctg
cgccgccagatcatcgatgccgggccggcgctccgcttcgacgggccggaagtatatctg
ggcaaccaggtggcgcgctgtctgacgcccaagtcgccgccgcggcggatcaccgccgaa
cgtgccaatcgtctcaccggcggcatgcgcgggtcgtccgaggacagcgaccagatcggc
gggccgttcctctatacgctcaatgtcctcttcgatcactcggccttcgagatccacaag
cgcgcgcagattctctcggcgcagaaggcggcggggtccttcgcggtcgaggtcggcaag
cagatcgaagagatcgggtggatcctggacgaggccggaaacacccggttcgtctcggta
atccccaccatgtgggtgttcggccgcgaccgccatcaggcccgcgagatggcggcgcgc
gccaagcggctgtgggagagcgaaccgctgccgtggatggtccaggaggaatcctacctc
aacccgatcctgctggccgcgagcctgcccttcggcctgtaccccgagcgacgcacgatc
ggtatgctgcagcgcgatttccgcgtgccggtgcgcgcgggcgtgctgatgtcgccgatc
caaaccgatttccggggcggcgggcggccggcgctgctctacacgggccgcaaggggcag
ctcatcacgctcgacctcttcgatccgcgtatcaacaactacaacttcatcgtctcggcg
gaatcgggcgcgggcaagagcttcctgctcaataacctgtgccagcagtatttcgcgcag
aacgcgctcatccgcatcatcgacatcggcggcagctacaagaagctctgcacgctctgc
tcgggccgttacatcgatctgggcgaagagcatctcgtcctcaatccgttcgacctgggg
ctcgctctcgacggcgacgatcgagagtccgcgatctcgatggcggtgtcgatcgtcgcg
gagatggccaacgccgggacgcgcaagggcgtcaccacgtccgaatggaacctgctcaag
tccgccgtgcaatgggcgatcgagagcggccgcgcggaagccgggatcgatgcggtgcgc
gaatggctcggctcctatccggccaacaccgtctccgatctcgaccgggtcgaccacctc
gtgcccacggcgcgcgaattggccttcaacctgcgtgatttcgggtcggacggagcctac
ggccattatttcaacggtcccagcacgttcgacatctcgaacgatgaattcgtggtgctc
gaactcgagcgcctgaaggccatgcctgacctgttcaacgtggtcgtcatggtggtgatc
aacgcggtaacgcaggaactctacctgtccgcccgtgatcgcccccgcttcgtgctgtgc
gatgaagccgcgcagttcatgacccgcgaagagggccaggacctgtcgcgcctcgccgag
gcgatcagccagggctatcgccgcgcccgaaaatatcgcggcagcttcggcatcattctc
cagagcatgaacgatctgctgctgttcggcggcacgggacaggtgatcctggaaaatgcc
gcgacgcgcttcctcctgcagggatcgacctatgacaaggcggtcgaaaacaagatcctc
gactattcgggtttcgtcctcgacctcctgaaatcggtccgcaacaacaaaccgaactat
tcggaagtcttcatcgacagcccgcttggcctcggcatcgcccggctcgtcgtcgatccg
ttcagctactggatcaacacctccgcgcccgaagacgtggccgcgttcgaggcgctggtc
cgcgccggacgctcgccgctcgaagcggtgtgcgatctcgccggcgtcgatcccgccggg
ataatcggcacgtccttcgatgacgcagcgccgctgaagcggagcgcgctgtcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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