KEGG   Stylophora pistillata (Smooth Cauliflower Coral): 111343597
Entry
111343597         CDS       T05774                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
  KO
K12647  interferon-induced helicase C domain-containing protein 1 [EC:5.6.2.6]
Organism
spis  Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:spis00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:spis04054]
    111343597
Enzymes [BR:spis01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     111343597
Pattern recognition receptors [BR:spis04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   111343597
SSDB
Motif
Pfam: ResIII DEAD RIG-I_C-RD RIG-I_C CARD_2 SWI2_SNF2 Yippee-Mis18 TRADD-like_N
Other DBs
NCBI-GeneID: 111343597
NCBI-ProteinID: XP_022806512
EnsemblRapid: LOC111343597
Position
Unknown
AA seq 1226 aa
MRPYARSDEKKILNERLKDFMEEVIPVDLLPYLTCLQQTDKEDIEATQNNKGPTTANQTL
VDRLKRRDKGFSHFVRALRQTGNEQTALLVDPYYLYPIDEGDDEVAVPDGSGIGYKRIGT
AIDVIIKGNLSLETSGDEEEPESCSADEEYLADLYKEHSSQESKQMRRELQRYLPRGAVF
VHTAKGSIITTIRLSTKEAAIKLWDMYTEGEFQKSLQHVLVDDTFKKHERIPEKPLKLNL
SICKERFVQMQNKLAEIEEEQEREEKMRSTLSSKPEDSATDDDDGSVPEVEEEIEIPPVY
LGTKANPFNVCELELREYQKELAAPALEGKNTIICAPTNSGKTYVAIEIAKNHLELFKAE
APTESSRRKRPKVVFIVSTVNLVSQQKERFELYLRDKYSVADISGANTMEIPLKYLLQSH
DIIVLTAQILVNALNSKTKEEQVNLEDISLLLFDECHHAHKEHSYNRIMETYLALKKQPR
KQGPLPQVTKTSYCFSWRHQNSKSLHNVAEIGISTVNKGLSLLLTFSFHSLAPTESSRRK
RPKVVFIVSTVNLVSQQKERFELYLRDKYSVADISGANTMEIPLKYLLQSHDIIVLTAQI
LVNALNSKTKEEQVNLEDISLLLFDECHHAHKEHSYNRIMETYLALKKQPRKQGPLPQVV
GFTASLGTGKAKSVQKAEEHILLVSANLDAEVISTVRKNQSELKKFAKVPERNVHQVSTT
GKDPFEKIISQVMKRIEAKVKGRKGEESTSVPQDDNKACQQYRQWVEELSKSAVADADRY
LITFAEHLREYHIALTINKSTTLKNAKKRLEKYFKSLDREKFLPIDKTLERLFQCAMELL
DKNVEEHGEPENPFLMKLKELLLQHYKEVTPQKREKVDHSSNGKADSENDTAKKCNDGCM
EGESLEAGASSRDSEKRREEDAKSGKEDKANGGNPEEHAKVVTAQEYSTHDREERGENGN
GNEESAKEGLVAWIQPISYFLKELGSSMVKVSSCFSYKFFFPYFSSFTRADEGMYSVLVS
EDSGALKRENTNRFRETLMVEALSKVQNISTNDFQRKVKAIQDKNFRDRKLKKGVMASKK
SKPVPDDVTLHCRKCNAAVCQAHDIRRVRETYYVIISSDVRESKVVLKNYPSPKKIDDVE
FNKKIYCKKCGQDWGVSVRINEVEWLCIKIASFVVQFPGPNPQRIMKKKWKDLPFSVEEA
TFEELWQQAEHEEQDCIEDDLSDLLD
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgagaccatacgcaaggtctgacgagaaaaagatcttgaatgaacggctgaaagacttt
atggaggaagtcattccagttgatttgctcccatatttgacttgtctacagcagacggat
aaagaggacattgaggctacacagaacaacaagggaccaacaacggcgaatcaaactctt
gttgatcggctgaaaagacgggacaaaggcttttcgcactttgtacgagccctgaggcaa
actggaaacgaacagacagctttgttggttgatccttactacctttacccaattgacgaa
ggggatgatgaggtagctgttccagatggctcggggatcggttataaaaggattggaaca
gcaattgatgttatcattaaaggcaacctatcattagagaccagtggggatgaggaagag
cctgaaagttgttctgcagatgaagaatatttggctgacctttacaaagaacattcgtcc
caggaaagcaaacagatgcgcagggaactgcagaggtatcttccccgaggagctgtcttt
gttcatactgctaaaggttccattatcaccactatccgcttatcaacaaaagaagcagcc
ataaaactgtgggatatgtacactgagggagaatttcaaaaatcattacaacatgttcta
gtggacgacacttttaagaaacatgagaggataccagaaaaaccgctgaaactgaacctc
agtatatgtaaagagcggtttgttcaaatgcagaataaactagcagagatcgaggaagag
caagagagagaggagaaaatgcgtagcaccttgtcaagcaagccagaagacagtgctact
gatgatgatgatggatctgtacctgaggtagaggaagaaatcgaaatcccacccgtgtat
ctgggaaccaaggccaacccatttaacgtatgtgagttggagctcagagaataccagaag
gagttggcagctccagcgctggaaggcaagaacaccataatctgtgccccaacaaatagc
ggaaagacgtacgtggcgatagaaatagctaagaaccatcttgagttattcaaagcagag
gcacctacagagagcagtcgtagaaaacgcccaaaagtcgtctttattgtgagcactgtg
aaccttgtttctcagcaaaaggagcggtttgaattgtacctgagagacaagtattcagtg
gctgatatttctggggcaaacacaatggagatcccacttaagtatcttctacaaagccat
gacatcattgttttgactgcccaaatacttgttaatgctcttaacagtaaaactaaagag
gagcaagtgaatttggaagatatcagtcttttgctatttgacgagtgccaccatgcacac
aaggagcattcctacaaccgtatcatggaaacgtatcttgccttgaaaaagcagcctcga
aagcaaggacctttgccacaagtaactaaaacttcatattgtttttcgtggcgtcatcag
aactctaagtcacttcataatgttgcagaaattgggataagcaccgtcaataaagggcta
agtttgcttctaactttttcttttcattccttagcacctacagagagcagtcgtagaaaa
cgcccaaaagtcgtctttattgtgagcactgtgaaccttgtttctcagcaaaaggagcgg
tttgaattgtacctgagagacaagtattcagtggctgatatttctggggcaaacacaatg
gagatcccacttaagtatcttctacaaagccatgacatcattgttttgactgcccaaata
cttgttaatgctcttaacagtaaaactaaagaggagcaagtgaatttggaagatatcagt
cttttgctatttgacgagtgccaccatgcacacaaggagcattcctacaaccgtatcatg
gaaacgtatcttgccttgaaaaagcagcctcgaaagcaaggacctttgccacaagttgtt
ggttttactgcatcgcttggtacaggaaaagctaaaagcgttcagaaggctgaagaacac
attcttcttgtttctgctaacttagatgcagaagttatttcaactgtgaggaaaaatcaa
tccgaactaaaaaagttcgcaaaagttcctgagcgaaatgttcatcaagtttcaacgact
ggaaaggatccatttgaaaagattatttcccaggttatgaagagaatcgaggccaaagtg
aaaggaagaaaaggagaggaatccacttctgttcctcaggatgataataaggcatgtcag
cagtatcgtcagtgggtcgaggagctctccaaaagtgctgtggcagatgcggaccgctac
ctcataacattcgcagaacatctccgagagtatcacatcgccttgacaatcaacaaaagc
accactctgaaaaatgctaagaaacgccttgagaaatatttcaaatccttggatagggaa
aaattcctacccattgacaaaactttggaacgtctgtttcagtgcgcaatggagttgttg
gataagaatgtagaagagcatggtgagcccgagaatccatttttaatgaaactaaaagaa
ttgctcctacagcactacaaagaggtaacgccccagaaacgcgagaaagtagaccactcc
agtaatggaaaggctgactcggagaatgacacagcgaaaaagtgcaatgatggatgcatg
gaaggtgagagtttggaggcaggagctagcagccgtgattctgagaagagaagggaagaa
gatgctaaaagtggaaaggaagataaggcaaatggtggcaatcctgaagaacatgcaaaa
gtagtaacagcacaagagtactcaactcacgacagggaagaaaggggtgaaaacgggaat
ggaaatgaagaatccgcaaaggaaggacttgttgcatggattcaaccgatttcttatttt
cttaaagaacttgggtctagcatggtcaaggtctcctcttgttttagctacaagtttttt
tttccttatttttcttcttttaccagggcggatgagggtatgtatagcgtgctcgtcagt
gaagattctggagctttgaaaagggaaaacacaaaccgtttccgagaaaccctcatggtt
gaagcccttagtaaagttcaaaacatttccacaaatgactttcagaggaaagtgaaagct
atacaggataagaactttcgggatcgcaagctaaagaagggtgtaatggcttcgaaaaag
tcaaagcctgttcccgatgatgtcaccctccactgccggaagtgcaatgcagcggtttgt
caggcacatgatatccgacgcgtaagagaaacctactacgtgatcatcagcagtgacgtc
cgggaatccaaggtggtcctgaagaactatccaagccccaagaaaattgatgatgtcgag
tttaacaagaaaatctattgcaaaaaatgtggtcaagactggggcgtaagcgttcgtatc
aatgaggtggagtggttgtgcatcaagattgctagcttcgttgttcagttccctgggcca
aatccccagcgaataatgaaaaagaagtggaaagatctccctttcagcgtcgaagaggca
acctttgaagagctctggcaacaagccgaacatgaggaacaagattgtatcgaagatgat
ctcagtgatttgcttgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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