KEGG   Stenotrophomonas rhizophila: BAY15_1341
Entry
BAY15_1341        CDS       T04500                                 
Name
(GenBank) DNA methylase
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
srh  Stenotrophomonas rhizophila
Pathway
srh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BAY15_1341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:srh03000]
    BAY15_1341
   03400 DNA repair and recombination proteins [BR:srh03400]
    BAY15_1341
Enzymes [BR:srh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     BAY15_1341
Transcription factors [BR:srh03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    BAY15_1341
DNA repair and recombination proteins [BR:srh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BAY15_1341
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HhH-GPD HTH_AraC
Other DBs
NCBI-ProteinID: AOA71775
UniProt: A0A1B2N2R4
Position
complement(1525915..1527372)
AA seq 485 aa
MDTALPLDYAACESARLARDARFDGVFFTAVRSTGIYCRPVCPAPPPKPVNVDYYPTAAA
AAAAGFRPCLRCRPELAPEAQDALSNETLQRALALIHDGFLQDAAVGDLAARLGLSARQL
QRLFVARLGAAPAQIHATRRLLLAKQLLTETALPVTDVAMAAGYNSLRRFNAAFVEGCGM
PPTAIRRQRGVLADGALTLRLGYRPPLDFAAMLGFLRRRCIPGIEQIDDTSYQRVIGPAE
RPSVIRVTADPRRPELLLQLGQVDPRAIPGIVRRVRRIFDLDADLRIVHATLGQDPLLAR
GIAARPGLRVPGGWDGFEVAVRAVLGQQVSVAAAITLARRVVDRFGTPLEGMPEGLDRQF
PTPQQLADAPLEGIGLPRTRAATVRAVAAAVADGRLDFHAGQRLDTFIERCVALPGIGPW
TAHYIALRALALPDAFPAGDLVLQQVLGGDTRLTERATEARSQAWRPWRAYAVLHLWHLA
TSASE
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggacaccgccctgcccctggactacgccgcctgcgaaagcgcccgcctggcccgcgat
gcgcgcttcgacggcgtgttcttcactgccgtgcgcagcaccggcatctactgccgtccg
gtctgcccggcgccgccacccaaaccggtcaacgtagactactaccccaccgccgccgct
gccgccgcggccggtttccgcccctgcctgcgctgccggccggaactggccccggaggcg
caggacgcactcagcaacgaaaccctgcagcgcgctctggcgctgatccacgatggcttc
ctgcaggatgcggcggtgggcgacctggccgcccggctcggcctgagcgcgcgccagctg
cagcggctgttcgtggcgcggctgggcgcggccccggcgcagatccacgctacccgacgg
ctgctgctggccaagcagctgctgaccgaaaccgcgttgccggtcaccgacgtggccatg
gccgccggctacaacagcctgcgccgattcaacgccgcgttcgtggaaggctgcggcatg
ccgcccaccgcgatccggcgccagcgcggcgtgctggccgacggcgcgctgaccctgcgc
ctgggctaccggccgccgctcgattttgccgcgatgctcggcttcctgcgccgccgctgc
attcccggcatcgagcagatcgacgacaccagctaccagcgcgtgattggcccggccgaa
cgcccctcggtgatccgggtcaccgccgacccgcgccggcccgagctgctgctgcagctg
ggccaggtcgatccgcgcgcgatccccggcatcgtgcgccgggtgcggcgcatcttcgac
ctggacgcggacctgcgcatcgtgcacgccacgctcggccaggatccgctgcttgcgcgc
ggtatcgccgcacgtcccgggctgcgcgtacccggcggttgggatggcttcgaagtggcg
gtgcgcgccgtgctgggccagcaggtcagcgtggcggcggccattaccctggcgcggcgc
gtggtagaccgcttcggcaccccgctggaaggcatgcccgagggcctggaccgccagttc
cccacgcctcagcagctggccgacgcgccgctggaaggcatcggcctgccgcgcacccga
gcggccaccgtgcgcgcggtggccgccgccgtcgccgacggcaggctggatttccatgcc
ggccagcgcctggataccttcatcgaacgctgcgtggcgctgcccgggatcgggccgtgg
accgcgcactacatcgcgctgcgcgccttggcgctgcccgatgccttccccgccggcgac
ctggtgctgcagcaggtgctgggcggcgatacccgcctgaccgagcgtgccaccgaggcc
cgttcgcaggcctggcggccctggcgtgcgtacgccgtgctgcacctgtggcatctggcc
acgtccgcttcggagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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