KEGG   Spiribacter roseus: BBH56_02445
Entry
BBH56_02445       CDS       T06143                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sros  Spiribacter roseus
Pathway
sros03030  DNA replication
sros03430  Mismatch repair
sros03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBH56_02445
   03430 Mismatch repair
    BBH56_02445
   03440 Homologous recombination
    BBH56_02445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sros03032]
    BBH56_02445
   03400 DNA repair and recombination proteins [BR:sros03400]
    BBH56_02445
Enzymes [BR:sros01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BBH56_02445
DNA replication proteins [BR:sros03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BBH56_02445
DNA repair and recombination proteins [BR:sros03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BBH56_02445
SSDB
Motif
Pfam: RNase_T PAS_9 PAS_4 RNase_H_2 PAS_8 PAS MLTR_LBD PAS_7 KASH_CCD Rv2179c-like Serine_rich Apolipoprotein
Other DBs
NCBI-ProteinID: AUB78077
Position
complement(481724..483793)
AA seq 689 aa
MRAFRLPRLRKRLWGSTAAIALLAGPAAFLLSGLHPLLAGAVAGLAPLIGGLLLDRRVTR
PLSATERGAGIIAGSNPGHRLELPSRHWLGRLPETIEQLGGTLARSRREMEEAASAWTTR
IEARKARLETILREIREGVVVCRDDGRITLYNRTARVLLDAEPALGLGRYLHEVLNDGPL
RHALSLIDPSADAASNADTELVCATASGERLLRCRVARLITDDPGTDGFVITLTDVSRQT
RAVLRREQSLREAVESLRDPLTSLCTVSESLRLAQQAQMSEDAERFGRMLHEETRRLTDA
FAHLSDETASMVTDNWRLEDLHLGSLIAGIKKNAAAGRLPRVQCSADVWVSAEPYLLSQV
IEALLMRLADTLAVSAVAVSGRGQGSLVYLDMNWSGDVVSPDQLDEWLDAGLDDVGGTVT
LREVLQRHDTTVWSQPDLSRPHRALLRLPLPGAPAKTEAPTPVAARPEYYDFAADEAEPV
RALGEAADTRLGDLDYVVFDCETTGLEPGHGDEIVAIGAVRIHQGRVMHGETFELLANPE
RPIPALASSIHGIHDEDVADAPPVDEVIRRFHAFAGDAVLVGFNIAFDMRFLRLRQRRCG
VRFDHPTLDALLLSILLHDHTGEHTLEGVARRLGVGVGGRHTALGDSLTTAEIMIQLFGL
LPEAGINRLEEAIDAQEKMVEFRRQQRAF
NT seq 2070 nt   +upstreamnt  +downstreamnt
gtgagagcctttcggctcccgcggctgcgcaagcggctatggggatcgacagcggccatc
gccctgctcgctggccccgcggcattcctgctgagtgggctgcatccgctgctggccggt
gcggtggcggggctggcaccgcttatcggcggcctgctgctggatcggcgcgtgacccgt
ccgctgagtgccaccgagcgcggggccgggataatcgccggctccaaccccggccatcga
ctggagctgccgtcgcggcactggctgggtcgcctgcccgagaccatcgagcagctcggt
ggcaccctggcgcgcagtcgccgcgagatggaagaagccgcctcggcctggaccacccgc
atcgaagcccgcaaggcccggctcgagaccatcctgcgcgagatccgtgaaggcgtcgtg
gtctgccgcgacgacggtcgcatcaccctctacaaccgcaccgcgcgcgtgctgctggac
gccgaaccggcgctgggtctggggcgctatctgcatgaagtcctcaacgacgggccgctg
cggcatgcgctgagcctgatcgatccctccgccgatgccgcgagcaacgccgataccgaa
ctggtctgcgcgaccgcgagcggcgagcgactgctgcgctgtcgggtggcgcggctgatc
accgacgatccggggaccgacggcttcgtcatcaccctcaccgacgtctcgcgccagacc
cgggcggtgctgcggcgcgagcagagcctgcgcgaggcggtggagtcgttgcgcgatccg
ctgaccagcctgtgcaccgtcagcgaaagcctgcgactggcccagcaggcgcagatgagt
gaggacgccgagcgcttcgggcgcatgctgcatgaagagacccgacgcctgaccgatgcc
ttcgcgcacctgtccgatgagaccgcctcgatggtcaccgataactggcggctggaggac
ctgcacctcggcagcctgatcgccggcatcaagaaaaacgccgcggcaggccggctgccc
cgggtgcagtgtagcgccgatgtgtgggtgtccgcggaaccctatctgctcagccaggtg
atcgaggcgctgctgatgcgtctggccgataccctggcggtcagcgccgtcgccgtatcc
ggacgcggccagggcagcctggtctatctggatatgaactggtcgggcgacgtcgtcagc
cccgatcagctcgacgagtggctggatgcgggcctcgatgatgtcggcgggacggtgacc
ctgcgcgaggtgctgcagcgtcatgacaccaccgtgtggagtcagccggacctgtcacgg
ccccatcgggcgctgcttcgactgccactgcccggtgcgccggcgaagaccgaggcgccc
accccggtcgccgcgcggcccgagtactacgacttcgccgccgacgaggccgagccggtg
cgggcgctgggcgaggcggccgacacccggctcggcgatctcgactatgtcgtctttgac
tgcgagaccacgggcctcgagcccggtcatggcgatgaaatcgtcgccatcggtgccgtg
cgcatccaccaggggcgggtcatgcacggcgagaccttcgagctactcgccaacccggag
cgtccgatcccggcgctggcatcaagcattcatgggattcatgacgaagacgtggccgat
gccccgccggtggacgaggtgatccggcgctttcatgcattcgccggcgacgccgtgttg
gtgggcttcaacatcgccttcgacatgcgctttctgcgcctcaggcagcgccgctgcggg
gtgcgctttgatcatcccacgctcgacgccctgctgctgtccatcctgctgcacgaccac
accggcgagcacacccttgaaggcgtcgcccggcggctgggggtgggcgtcggtgggcgt
cacaccgcgctgggggattcgctgaccaccgctgagatcatgatccagctcttcggactg
ctccccgaggcgggcatcaaccgacttgaggaggcgattgacgcccaggaaaaaatggtc
gagttccgccgccagcagcgtgccttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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