KEGG   Segniliparus rotundus: Srot_1548
Entry
Srot_1548         CDS       T01238                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
srt  Segniliparus rotundus
Brite
KEGG Orthology (KO) [BR:srt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srt03016]
    Srot_1548
Enzymes [BR:srt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Srot_1548
Transfer RNA biogenesis [BR:srt03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Srot_1548
 Prokaryotic type
    Srot_1548
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADG98011
UniProt: D6Z7T1
Position
1543540..1544454
AA seq 304 aa
MPGEHSQDPHGLVIVDKPQGMTSHDMVAKARRFFRTRKVGHAGTLDPMATGVLVLGLGKA
TRLLGRLTADEKRYHGTIRLGEQTASDDADGEVVRRASAAGVALDAIMAGIAALTGEISQ
VPPAVSAIKVGGVRAHAAARAGAALELKARQVVVRRFELVAERKLIGADGAELWDLDVEV
DCTAGTYIRSLARDLGAGLGVGGHLSRLRRVASGPFTITQARCLASLEADPSCSMTLDEA
ARAAFAARDLSADQTRDLGHGKKIPAAGVAGEYAGFSPEGSLVALLEERDGKACPTAVFQ
PAGG
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcctggtgaacacagccaggacccgcacggactcgtcatcgtcgacaaaccccagggc
atgaccagccacgacatggtcgcgaaggcccggcgttttttccgcacccgcaaggtgggg
cacgcggggacgctcgacccgatggccacgggcgtgctcgtgctggggcttggcaaggcc
acccggctgctcggcaggctcaccgcggacgagaagcgctatcacgggacgatccggctg
ggggaacaaaccgccagcgacgacgcggacggggaggttgtgcggcgcgcttcggccgca
ggggtcgcattggatgcgatcatggcggggatcgcagcgctgaccggggagatctcacag
gtgccgcccgctgtttcggcgatcaaggtcggcggggtccgcgcgcacgccgctgcgcgg
gcgggggcggcgttggagctgaaggcgcggcaggtcgtcgtgcggcggttcgagctggtg
gccgagcgcaagctcatcggcgcggacggggccgagctgtgggatctcgacgtcgaggtg
gattgcacggcaggcacgtatatccgatcgctggcgcgggacctcggagcgggactgggc
gtcggggggcatctgagccgtttgcgccgggtcgcgtccgggccgttcacgatcacgcag
gcacgttgtctcgcgtcgttggaagcggacccctcgtgcagcatgaccttggacgaggcg
gcccgggcggcgttcgccgcgcgggacctttccgcggaccagacgcgagatttgggccac
gggaagaagatccccgccgcaggcgtggcaggcgagtacgccgggttcagcccggaaggc
tctctcgtggcgcttctcgaagagcgcgacggcaaggcgtgcccgaccgcggtgttccaa
cctgcgggcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system