KEGG   Serratia plymuthica S13: M621_03140
Entry
M621_03140        CDS       T02716                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sry  Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:sry00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sry03021]
    M621_03140
Transcription machinery [BR:sry03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     M621_03140
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 AAA_22
Other DBs
NCBI-ProteinID: AGP42955
UniProt: S4YER8
Position
complement(676714..679620)
AA seq 968 aa
MPFTLGQRWISDTESELGLGTVVALDVRMVTLLFPATGENRLYARSDSPITRVMFNPGDT
ISNHEGWELQVEEVKEDNGLLTYIGTRLDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQYRLPFAGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYSEAKL
DSSNPFETEQLVICSLDFVRRNKQRLEELADAQWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPSRFHDYQEFVSEQQKYRPVADAVTLLL
SGERLADDKLNMLGELIDEQDIEPLLKAANSDAEGAEQARQELVTMLMDRHGTSRVLFRN
TRNGVKGFPHRNLHQIKLQLPTQYQTAIKVSGIMGAKKTVEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLDYLVANRDKKVLVICAKADTALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQMHEIEIMVPYLENTAQAVLVRWFHEGLDAFEHTCPTGRTIYDSGYEQLIGFLAAPTEH
EGLDEFIHACRQQHDNLKAQLEQGRDRLLEMHSNGGEKAQALAEAIANQDNDVNLVGFAL
NLFDIVGINQDDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQDVHAMLQQAESLVEDQAR
ALIEQAKQEADDKLSTELARLEALKAVNPNIRDDEVEALEFNRKQVLVNLNEAGWRLDAI
RLVVVTHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcaacgctggatcagcgatacggaaagcgaattaggtctggga
accgtcgtggcgctggatgtgcgcatggttaccctgcttttccccgccaccggtgaaaac
cgcctctatgccagaagtgactcgccaatcacccgcgtgatgttcaatccgggcgacacc
atcagtaaccacgaaggatgggaactgcaggtagaagaagtcaaagaggataacggcctg
ctgacctatatcggcacccgcctggacacccaggaaagcggcgtggcgatgcgcgaagtg
ctgttggacagcaagctgaccttcagcaagccgcaggaccgtctgtttgccggccagatc
gaccgtatggatcgcttcgccctgcgttatcgcgcacgtaaataccaaagcgagcagtat
cgcctgccgttcgcgggcctgcgcggcatgcgtgccagcctgatcccccaccagttgcac
atcgcttatgaagtcgggcagcgccatgcgccgcgcgtactgctggcggatgaagtcggt
ctggggaaaaccatcgaagccgggatgatcatccatcagcaactgctggcgggccgcgcc
gagcgcgtactgatcgtggtgccggaaacgctccagcaccagtggctggtcgaaatgatg
cgccgcttcaacctgtatttctcgctgttcgacgacagccgttactcggaagccaaactc
gacagcagcaatccgtttgaaaccgaacagctggtgatctgctcgctggacttcgtgcgc
cgcaacaagcagcgcctggaagagctggcggacgcccagtgggatctgctggtggtcgat
gaagcccaccacctggcctggagcgaagaagcgccaagccgcgaataccaagtcatcgaa
cagttggcggaacacatccccggcgtactgctgctgaccgcaacccctgagcagcttggc
cagcaaagccacttcgcccgtctgcgcctgctggatccgagccgtttccacgattaccaa
gaattcgtcagcgaacagcaaaaataccgcccggtcgccgatgccgttaccctgctgctg
agcggcgaacgtctggccgatgacaagctgaacatgctgggcgaactgatcgacgagcag
gacatcgaaccgttgctgaaggccgccaatagcgacgccgagggcgccgagcaggcgcgc
caggagctggtcaccatgctgatggaccgccacggcaccagccgcgtgctgttccgcaac
acccgcaacggcgtcaaaggcttcccgcaccgcaatctgcaccagatcaagctgcaactg
ccgacccagtaccagaccgcaatcaaagtgtccggcatcatgggggcgaagaaaacggtt
gaagcgcgcgcgcgcgatatgctgtacccagagcaaatctaccaggaattcgaaggcgag
aacgccacctggtggaactttgatccgcgcgtggagtggctgctggactacctggtggcc
aaccgcgataagaaagtgctggtgatctgcgccaaggccgacaccgcgctgcaactggaa
caggtgctgcgtgagcgtgaagcgatccgcgctgcggtgttccacgaagggctgtcgatt
atcgaacgtgaccgcgccgccgcctacttcgcctcagaagaagacggcgcccaggtgttg
ctgtgctcggagatcggttccgaaggccgcaacttccagttcgccagccacctggtgatg
tttgatctgccgttcaacccggatctgctggagcagcgtatcggccgtctggaccgtatc
ggccagatgcatgaaattgaaatcatggtgccgtacctggaaaacaccgctcaggcggtg
ctggtgcgttggttccatgaagggctggatgcctttgagcacacctgcccgaccggccgc
accatttatgacagcggctacgagcagttgatcggcttcctggctgcgccgaccgagcat
gaagggctggacgaattcattcacgcctgccgccaacagcacgataacctcaaagcgcaa
ctggagcagggccgcgatcgcctgctggaaatgcactccaacggcggcgagaaagctcag
gcactggcggaggccatcgccaatcaggacaacgacgtcaatctggtgggctttgcgctt
aacctgttcgacatcgtcggcatcaaccaggacgatcgcagcgacaacctgattgtgctg
acgccgtccgatcacatgctggtgccggacttccctggcctgccgcaagacggctgcacc
gtcaccttcgatcgcgaacaggcgctgtcgcgtgaagacgcgcagttcgtcagttgggaa
cacccgatcatccgtaacggcctggacctgatcctgtccggcgataccggcagctgtgcg
gtgtccctgttgaaaaacaaggcgctgccggtcggcaccttgctggtcgaactggtgtac
gtggtggaggcgcaggcgccgaaacacctgcaactgacccgcttcctgccaccgacgccg
atccgcatgctgatggaccgcaaaggcaccaacctggcggcgcaggtcgaattcgaaagc
ttcaaccgtcagttgaacgcggtcaaccgccatacttccagcaagttggtcaacgccgta
cagcaggacgtacacgccatgctgcaacaggcggaaagcctggttgaagaccaggcgcgc
gcgctgattgaacaggcgaagcaggaagcggacgacaagctgagcaccgaactggcgcgt
ctggaagcgctgaaagcggttaacccgaacatccgtgatgacgaagtggaagcgctggag
ttcaaccgtaaacaggtactggtcaacctgaatgaagcgggatggcgtctggacgctatc
cgtctggtggtggtcactcaccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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