KEGG   Serratia rubidaea: AXX16_3569
Entry
AXX16_3569        CDS       T04417                                 
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
srz  Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:srz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:srz03009]
    AXX16_3569
Enzymes [BR:srz01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     AXX16_3569
Ribosome biogenesis [BR:srz03009]
 Prokaryotic type
  ribosomal protein modification factors
   AXX16_3569
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TRAM Methyltransf_2 CLP1_P
Other DBs
NCBI-ProteinID: AML59260
UniProt: A0A4V6JGS8
Position
3845994..3847301
AA seq 435 aa
MAKIGFLSLGCPKNLVDSERILTELRNEGYQVVPRYDDAELVIVNTCGFIDSAVQESLEA
IGEALHENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLSHVHHYVPKPPHNPFT
SLIPAQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDAGV
KELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLAGLGVWVRLHYVYPYPHVDE
VIPLMAAGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPELTLRSTFIV
GFPGETEEDFQLLLDFLQLAQLDRVGCFKYSPVEGAAANELADPVPEEVKEARYHRFMQL
QQQISAQRLQEKVGRELLVLIDDVDAEGATGRSMADAPEIDGAVYLNGDTGVNVGDIVKV
RIDHADEYDLWGSRV
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggctaaaattggatttttatcattaggttgccctaaaaacctggtggattcggaacgg
atcctcactgaactgcgtaacgaaggctatcaggtggtgccgcgttacgatgacgccgag
ctggtgatcgtcaatacctgcggctttatcgacagcgcggtgcaagagtcgctggaggcg
atcggcgaagcgctgcatgagaacggcaaggtgatcgtcaccggctgcctcggcgccaaa
gaagaccaaatccgcgaagtgcaccccaaggtgctggaaattaccgggccgcacagctac
gagcaggttttgtcgcacgttcatcactatgtgccgaagccgccgcataacccgttcacc
agcctgataccggcgcagggcgtcaaactgacgccgaaacactacgcctacctgaaaatc
tccgaaggctgcaaccaccgctgcaccttctgcatcattccgtcgatgcgcggcgatctc
gacagccgccccatcggctcggtgctggatgaagccaaacgtctggtagacgccggcgtc
aaagagctgctggtgatctcccaggacacctccgcctacggcgcagacgtgaaacagcgc
accggcttctggaacggccagccggtgaaaaccagcatggtcagcctgtgcgaacagctg
gccggcctcggcgtctgggtgcgtctgcactatgtctacccgtacccgcacgtggatgag
gtgatcccgctgatggccgccggcaagattttgccgtatctggatattcccctgcagcac
gccagcccgaaaattctcaaactgatgaagcgcccgggcgcggtcgaacgcacgctggag
cgcatcaaacgctggcgtgagatctgcccggaactgacgctgcgctccacctttatcgtc
ggcttcccgggggaaaccgaggaggatttccagctgctgctcgacttcctgcagctggcc
caactggaccgcgtcggctgctttaaatacagcccggtggaaggcgccgcggccaacgaa
ctggcggacccggtgccggaagaggtcaaagaggcgcgctaccaccgctttatgcagctg
cagcaacagatctcggcgcagcgcctgcaggaaaaagtgggccgtgaactgctggtgctg
atcgacgacgtcgacgcggaaggcgcgaccggtcgcagtatggccgacgcgccggagatc
gacggcgcggtgtacctgaacggcgacaccggcgtcaacgtgggggatatcgtgaaagtg
agaatcgaccacgccgatgaatatgacctgtggggcagccgcgtctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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