KEGG   Sus scrofa (pig): 100156729
Entry
100156729         CDS       T01009                                 
Symbol
WDR5
Name
(RefSeq) WD repeat-containing protein 5
  KO
K14963  COMPASS component SWD3
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03083  Polycomb repressive complex
ssc04934  Cushing syndrome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100156729 (WDR5)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    100156729 (WDR5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100156729 (WDR5)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     100156729 (WDR5)
    NSL complex
     100156729 (WDR5)
   HMT complexes
    COMPASS/SET1 complex
     100156729 (WDR5)
    COMPASS/SET1 complex (yeast)
     100156729 (WDR5)
    MLL-HCF complex
     100156729 (WDR5)
    MLL3/MLL4 complex
     100156729 (WDR5)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100156729 (WDR5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 eIF2A WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_HPS5 WD40_like Beta-prop_NUP159_NUP214 RMC1_N Beta-prop_WDR75_2nd PROPPIN Ge1_WD40 Beta-prop_VPS8 Beta-prop_Vps41 VPS8_N WDR54 Beta-prop_LRRK2 Beta-prop_WDR11_1st VID27 Mala_s_1-like CDtoxinA Nucleoporin_N
Other DBs
NCBI-GeneID: 100156729
NCBI-ProteinID: XP_003353752
Ensembl: ENSSSCG00000024912
UniProt: A0A4X1SWV7 A0A480F1C4
Position
1:273560274..273577827
AA seq 334 aa
MATEEKKPETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL
ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK
CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN
RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL
WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH
TDVVISTACHPTENIIASAALENDKTIKLWKSDC
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcaaccgaggagaagaagccggagaccgaggccgccagagcgcagcccgccccgtcg
gcggcagccacgcagagcaagcccacacctgttaaacccaactacgcgctgaagttcacc
ctggccggccacacgaaagctgtgtcctcggtgaagttcagcccgaacggggagtggctg
gcgagttcgtctgcagataaactcattaagatttggggagcttacgacggaaaatttgag
aaaaccatatctggtcacaagctgggaatatcagacgtggcctggtcgtcagactctaac
cttctcgtttctgcctcagatgacaagaccctaaagatatgggacgtgagctcggggaag
tgtctgaagaccctcaagggacacagtaattacgtcttctgctgtaacttcaacccccag
tccaacctcatcgtctcgggctccttcgacgagagcgtgaggatttgggacgtgaagaca
gggaagtgcctcaagacgctgcccgcgcactcggatcccgtctcagccgttcactttaac
cgggacggctccctgatcgtgtcgagcagctacgacggcctctgccggatctgggacacc
gcctcgggccagtgcctgaagacgctgatcgatgacgacaacccgcccgtgtccttcgtg
aagttctctccgaacggcaagtacatcctggccgcgaccttggacaacacgctgaagctc
tgggactacagcaaagggaagtgtctgaagacgtacaccggccacaagaatgagaagtac
tgcatattcgcgaatttctctgtcactggcgggaagtggatcgtgtcgggctcggaggac
aacttggtttacatctggaacctgcagacgaaagagattgtgcagaagctgcagggccac
acggacgtggtcatctcgacggcctgccaccccacagagaacatcatcgcctcggccgcg
ctggagaacgacaagaccatcaagctctggaagagcgactgctag

  All links  
Gene (53)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (50)   
   Pfam (50)   
All databases (119)   

Download RDF
DBGET integrated database retrieval system