KEGG   Sus scrofa (pig): 100621518
Entry
100621518         CDS       T01009                                 
Symbol
RBBP8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X2
  KO
K20773  DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100621518 (RBBP8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100621518 (RBBP8)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-C complex
     100621518 (RBBP8)
SSDB
Motif
Pfam: CtIP_N SAE2
Other DBs
NCBI-GeneID: 100621518
NCBI-ProteinID: XP_003356422
Ensembl: ENSSSCG00000024419
UniProt: A0A4X1VMH3 I3L8X9
Position
6:107923921..108020067
AA seq 892 aa
MNISGNSCGSPGSADVSNDFKDLWTKLKEYHDKEVQGLQVKVTKLKKERILDAQRLEEFF
TKNQQLREQQKVLHETIKVLEDRLRAGLCDRCAVTEEHMRKKQQEFENIRQQNLKLITEL
MNEKNTLQEENKKLSEQLQQKIENDQQHQATDVESEEDIIPDSPITAFSFPGANRLRRKE
NLHIRYVEQTQTNVEHTGCANELRKVPKSSTHLQHKPNEGEILVADTCDQSQAPIAKTHG
TSSYPGDNLATVVAETLGLSVQEESESRGPRSPLGDELYHCLEGDHKKQPFEESRRNSED
SLRFSDSISKTPPQEELTIRVSSPVFGATSNMKSSLGLNTSLSPSLLESGKKNHLKTVPC
SNTSNSRLEKPRSKSEDSTLFTHHSLGAEANKITNQSCNKPVLINKSISEPVGEQNDIDH
IKDTVTDKDKHVVPLKSLGGRTKRKKIEEENEDEVSCPQASFDKENAFPFPLGNQSYMNG
DYVMDKPLDLSDRFSAIHRQEKSQGSETSKIRFRQVTLFESLKPVPKGSSSSRKALSGGC
GLAKDFPEEPYLQESLLQSLNKSPDKTLVQIKEENPVFKIPLRPRESLETEDPLDDVKGA
GSHEPIKIKTRSVHGACELASVLQLNPCRISKTKSLQNNQDESFENIQWSIDPGADLSQY
KMDITVIDTKDGSQSRLAGGETLDMDCTLVSETMLLKMKKQEQKGEKSPNDERKMNDSLE
DMFDRTTHEEYESCLADSFPQVAEEEKELSATTKKPNTHGDKQDKVKQKAFVEPYFKGDE
RETSLQNFPHIEVVRKKEERRKLLGHTCKECEIYYADFPAEEREKKLASCSRHRFRYIPP
STPENFWEVGFPSTQTCMERGYIKEDLDPCPRPKRRQPYNAIFSPKGKEQKT
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgaacatctcaggaaacagttgtggaagccctggttctgcagatgtatctaatgacttt
aaggatctttggacaaaactaaaggagtatcatgataaagaagtacaaggtttacaagta
aaagtaaccaaactgaaaaaggaacgaattttagatgcacagagactggaagaattcttc
accaaaaatcaacagctgagagagcaacaaaaagtccttcatgaaaccattaaagtttta
gaagatcgattaagagcaggattatgtgatcgctgtgcagtaactgaagaacatatgcgg
aagaaacagcaagagtttgaaaatatccggcagcagaatcttaaacttatcacagagctt
atgaatgaaaagaatactctacaggaagaaaataaaaagctttctgaacagctgcagcag
aaaattgagaatgatcagcagcatcaagcaactgatgttgaatctgaggaagacattatt
ccagattcaccaataacagctttttcatttcctggtgctaaccggctacgaagaaaggag
aaccttcacatccgatatgtggaacaaacacagactaatgtggagcacactgggtgtgca
aatgaattgagaaaagttccgaagtcttccactcatctacaacataagcctaatgaaggt
gaaattctagtggccgacacttgtgatcagagccaggctccaatagctaaaacacatgga
acaagcagttatcctggtgataatttagccacagttgttgctgaaacacttggacttagt
gttcaagaagaatctgaatctcgaggccccaggagccctcttggtgatgagctctaccac
tgtctggaaggagatcacaagaaacaaccttttgaggaatcaagaagaaatagtgaagat
agtttaagattttcagattcaatttcaaagactcctcctcaagaagaactgactattcgg
gtgtcatctcctgtatttggagctacctctaatatgaaaagtagtttaggtttgaataca
agtttgtccccttctcttttagagagtgggaagaaaaaccatctgaaaacagtgccttgc
agtaacacttctaattctagattggagaaacctagatcaaaatctgaagatagtaccctt
ttcacacatcatagtcttggggctgaagcgaacaagatcactaaccagtcatgtaacaag
ccagtgcttataaataaaagtataagtgaacccgtaggtgaacagaatgatattgatcac
attaaagatactgttaccgataaagataaacatgtggtacccctgaaatcattaggaggc
agaaccaaaaggaagaaaattgaggaagaaaatgaagatgaagtaagctgcccccaagcc
tcttttgataaagaaaatgctttcccttttccactgggtaatcagtcttacatgaatgga
gattatgtgatggataaacctctggatctgtctgatcgattttcggctattcaccgtcaa
gagaaaagccaaggaagtgagacctctaaaatcagatttaggcaagtgactctttttgag
tctctgaagcccgttccaaaaggctcttcctcaagccgtaaggccttgagcgggggctgt
gggttagccaaagatttcccagaggagccctatttacaggagtctcttctccaatccctg
aataaatctccagataaaacactggtgcaaataaaagaagaaaatccagtctttaaaatc
cctctacgtccacgtgaaagtttggagacagaggatcctttggatgacgtgaagggtgct
ggttctcatgagccaataaaaataaaaaccaggtcagtccatggagcatgtgaacttgcg
tcagttcttcagttaaatccgtgtagaatttctaagacaaagtctctacagaacaaccaa
gatgaatcctttgaaaatatccagtggagtatagatccaggagcagacctttctcagtat
aaaatggatattaccgtcatagatacaaaggatggcagtcagtcaagattagcaggagga
gagacattggatatggactgtacgttggttagtgaaactatgcttttaaaaatgaagaag
caagagcagaagggagaaaaaagtccaaatgacgaaagaaaaatgaatgatagcttggaa
gatatgtttgatcggactacacatgaagagtatgaatcctgtttggcagatagcttccct
caagtagcagaagaagagaaggaattatcagctactacaaagaaaccaaacactcatggt
gataaacaagataaagtcaaacagaaagcatttgtggagccatactttaaaggtgatgaa
agagagaccagcttacaaaattttcctcatattgaggtggttcggaaaaaagaagagaga
agaaaattgcttggacacacatgtaaggaatgtgaaatttattatgcagatttcccagca
gaagagagagaaaagaagttggcttcttgctcaagacaccgatttcgctacattccaccc
agcacaccagagaatttctgggaagttggttttccttccactcagacttgtatggaaaga
ggttacattaaggaagatcttgatccttgtcctcgtccaaaaagacggcagccttacaat
gcgatattttctccgaaaggcaaagagcagaagacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (14)   
   UniProt (2)   
   RefSeq(pep) (12)   
DNA sequence (14)   
   RefSeq(nuc) (12)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

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