KEGG   Streptococcus suis 98HAH33 (serotype 2): SSU98_0408
Entry
SSU98_0408        CDS       T00515                                 
Name
(GenBank) Predicted HD superfamily hydrolase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ssv  Streptococcus suis 98HAH33 (serotype 2)
Pathway
ssv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SSU98_0408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssv03019]
    SSU98_0408
Messenger RNA biogenesis [BR:ssv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SSU98_0408
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD DivIVA ATP-synt_B KhpA-B_KH LapA_dom
Other DBs
NCBI-ProteinID: ABP91566
UniProt: A4VZM7
Position
400950..402563
AA seq 537 aa
MNIITVVVTLVSALIGLVLGYFAISLKMKSAKETAELTLLNAEQEASNVRGRAEEQAEVI
LKTAERDRQTLKKELLLEAKEEARKYREEIAEEFKSERQELKQIESRLTERATSLDRKDD
NLTNKEKTLEQKEQSLTDKAKHIDEREQEVVKLEEQKALELERVAALSQEEAKEIILTDT
RDKLTHEIATRIKEAEREVKERSDKMAKDLLAQAMQRISGEYVAEQTITSVHLPDDAMKG
RIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTMETLLQDGRIHPAR
IEELVEKHRVEMDNRIREYGEAAAYEVGAPNLHPDLIKIMGRLHFRTSYGQNVLRHSIEV
AKLAGVLAAELGENVNLARRAGFLHDVGKAIDREVDGSHVEIGTELAKKYKENPIVINAI
ASHHGDVEATSTIAVIVAAADALSAARPGSRRESMEAYIKRLQDLEEIANSFEGIKQSYA
IQAGREIRIIVHPNKVTDDQITILAHDVREKIENNLDYPGNIKITVIRETRATDVAK
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgaatatcattacagtagtagtgacacttgtttctgctctcattggtttagtattaggt
tactttgccatttctttgaagatgaaatctgcaaaagaaactgcagaattgacactttta
aacgcagaacaagaagctagtaatgttcgtggtcgagcagaagagcaagctgaggttatt
ctaaaaacagctgagcgcgatcgccagaccttgaaaaaagaattactcttggaagctaag
gaagaagctcgtaagtaccgagaagaaattgcagaagaatttaagtcagaacgtcaagag
ttgaagcaaatcgaatcacgcttgacagagcgtgcgaccagtttggaccgcaaagacgat
aatttgaccaacaaggaaaagactttggaacaaaaggaacaaagtctgaccgataaagct
aagcacattgatgagcgtgaacaagaagttgtaaaactcgaagaacaaaaagctttggag
ttagaacgagtggcggccctcagtcaagaagaggcgaaggaaatcatccttaccgataca
cgtgataaactgacgcatgaaattgcgactcgtatcaaggaagcagagcgtgaagtaaaa
gaacgttctgacaaaatggcaaaggacttgttagcccaagcgatgcaacgcatatcaggt
gaatatgtggctgagcagacgattacatcggttcatttaccggatgatgcgatgaaggga
cggattattggacgtgagggtcgaaatattcgtacctttgaaagtctcacaggtatcgat
gttatcattgatgatacaccagaagtggttgttctatcaggttttgatccgattcgccgt
gagattgcccgtatgaccatggagaccttgcttcaagatggtcgtattcatccagctcgt
attgaggagttggttgagaaacatcgtgtagagatggataaccgtattcgtgagtacggg
gaagctgctgcttatgaagttggggcaccaaaccttcatccagacttgattaaaatcatg
gggcgtttgcatttccgtacctcttatggacaaaatgttcttcgccactcaatcgaagtt
gctaaattagcaggtgtacttgctgctgaattgggcgagaatgtgaatttggcacgtcga
gctggtttcctacatgacgttggtaaagctattgaccgtgaggtggatggaagccacgtt
gaaatcggtacagaattagctaagaaatataaagagaatccaattgttatcaatgcgatt
gctagtcaccatggcgatgtagaagcaacaagtactattgcagtcattgtggctgcggca
gatgctctgagcgctgctcgtccaggttcacgtcgtgaatctatggaagcctacatcaaa
cgtctgcaagacttggaagaaatcgccaacagttttgaagggattaaacaatcctatgct
attcaggctggtcgtgaaattcggattatcgttcatcctaacaaggtcactgatgatcag
attaccatcttggcccatgatgttcgtgagaaaattgaaaataatctggattatccagga
aatatcaaaatcacagttatccgtgaaacaagagcaacagatgttgctaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system