KEGG   Saccharothrix syringae: EKG83_39090
Entry
EKG83_39090       CDS       T06258                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ssyi  Saccharothrix syringae
Pathway
ssyi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssyi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EKG83_39090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyi03019]
    EKG83_39090
   03016 Transfer RNA biogenesis [BR:ssyi03016]
    EKG83_39090
Enzymes [BR:ssyi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     EKG83_39090
Messenger RNA biogenesis [BR:ssyi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EKG83_39090
Transfer RNA biogenesis [BR:ssyi03016]
 Prokaryotic type
  tRNA degradation factors
   EKG83_39090
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 KhpA-B_KH DUF1773
Other DBs
NCBI-ProteinID: QFZ22639
UniProt: A0A5Q0H8W8
Position
complement(9363455..9365704)
AA seq 749 aa
MTDIEVHETSAVIDNGRFGTRTIRFETGRLARQAAGSVVAYLDDDTMLLSATTASKQPKE
HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ
VVITVMSLNPADLYDVVAINAASASTQLAGLPFSGPIGGVRVALIEGQWVAFPTHEQLGK
AVFDMVVAGRVVGDDVAIMMVEAEATEHVIDLVGEGAQAPTEEVVAAGLEAAKPFIKALC
DAQAQLARVAAKATGEFPTYPAYQPDAYEAVEQAASGELAQALTIAGKQERENRIDEVKA
SVLEKLAEQFEGREKEVGAAFRSLTKKLVRQRILRDKVRIDGRGLTEIRSLSAEVELIPR
AHGSALFERGETQILGVTTLNMLRMEQQIDSLSPETHKRYLHHYNFPPFSTGETGRVGSP
KRREIGHGALAERALVPVLPKREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVSGIAMGLVSDEVDGKTEYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPSDVLAGALNQARDARLTILEVMAEAIDRPDEMSPFAPRVTSVKIPTDKIGEVIGPKG
KMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIGMINAIANPQLPKVGERFLGTVVK
TAAFGAFVSLLPGKDGLIHISKLGNGKRIGKVEDVVKVGDKLRVEIADIDQRGKISLVLV
NEDADAPKADEAQADNPAQDAAPAEASAE
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgacggacatcgaggtccacgagacttcagccgtgatcgacaacggtcggttcggcacc
cgcaccatccgcttcgagacgggccggctggcccgccaggccgcgggcagcgtcgtcgcc
tacctggacgacgacaccatgctgctgtcggccaccacggcctcgaagcagcccaaggag
cacttcgacttcttccccctcacggtggacgtcgaggagcgcatgtacgccgcgggccgc
atccccggctcgttcttccgccgcgagggtcgcccgtcgaccgacgcgatcctgacctgc
cgcctgatcgaccggccgctgcgcccgtccttcgtggacggcctgcgcaacgagatccag
gtcgtcatcacggtgatgagcctgaacccggccgacctgtacgacgtggtggcgatcaac
gccgcgtccgcgtccacgcagctggccggcctgccgttctccggcccgatcggcggcgtc
cgggtggcgctgatcgagggccagtgggtggcgttcccgacccacgagcagctcggcaag
gccgtgttcgacatggtcgtggccggccgcgtggtcggtgacgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagcacgtgatcgacctggtcggcgagggcgcgcaggcgccc
accgaggaggtcgtcgcggcgggcctggaggcggccaagccgttcatcaaggccctgtgc
gacgcgcaggcgcagctcgcgcgggtggccgccaaggcgaccggcgagttcccgacctac
ccggcctaccagcccgacgcctacgaggccgtcgagcaggccgcgtcgggcgagctggcc
caggcgctgaccatcgcgggcaagcaggagcgcgagaaccgcatcgacgaggtcaaggcg
tcggtgctggagaagctggccgagcagttcgagggccgggagaaggaggtcggcgccgcg
ttccgctcgctgaccaagaagctggtccgccagcgcatcctgcgcgacaaggtgcgcatc
gacggccgcggcctgaccgagatccgctcgctgtccgccgaggtcgagctgatcccgcgg
gcgcacggctcggcgctgttcgagcgcggcgagacccagatcctgggcgtcaccacgctg
aacatgctgcgcatggagcagcagatcgactcgctgtcgccggagacgcacaagcgctac
ctgcaccactacaacttcccgccgttctccaccggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctggccgagcgggccctggtgcccgtgctgccc
aagcgcgaggagttcccgtacgcgatccgccaggtctccgaggcgctgggctcgaacggc
tcgacctcgatgggctcggtctgcgcgtccacgatgtcgctgctcaacgcgggcgtgccg
ctgaaggcgccggtgtcgggcatcgccatgggcctggtctccgacgaggtcgacggcaag
accgagtacgtggcgctgaccgacatcctcggtgccgaggacgcgttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgcgctccagctcgacaccaagctggac
ggcatcccgtccgacgtgctggcgggcgccctgaaccaggcccgcgacgcgcgcctgacc
atcctggaggtcatggccgaggccatcgaccgcccggacgagatgagcccgttcgcgccg
cgcgtgacctcggtgaagatcccgaccgacaagatcggcgaggtcatcggccccaagggc
aagatgatcaactcgatcaccgagcagaccggcgccgacatctccatcgaggacgacggc
acgatctacgtgggcgcggccgacggcccgtccgccgaggccgcgatcggcatgatcaac
gccatcgccaacccgcagctgccgaaggtgggcgagcgcttcctgggcaccgtggtcaag
accgcggcgttcggcgcgttcgtgtccctgctgccgggcaaggacggcctgatccacatc
tccaagctgggcaacggcaagcgcatcggcaaggtcgaggacgtcgtcaaggtcggcgac
aagctccgcgtggagatcgcggacatcgaccagcgcggcaagatcagcctcgtgctggtc
aacgaggacgccgacgcgcccaaggcggacgaggcccaggccgacaacccggcccaggac
gccgctccggcggaggcttcggccgagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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