KEGG   Streptococcus thermophilus LMG 18311: stu0397
Entry
stu0397           CDS       T00213                                 
Name
(GenBank) conserved hypothetical protein, KH domain protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
stl  Streptococcus thermophilus LMG 18311
Pathway
stl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    stu0397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stl03019]
    stu0397
Messenger RNA biogenesis [BR:stl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     stu0397
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KhpA-B_KH RRF KH_2
Other DBs
NCBI-ProteinID: AAV60115
UniProt: Q5M5Q8
Position
384737..386344
AA seq 535 aa
MINMIILVVFALIGLVVGYSAISIKLSKAKEQAETILLKAEQDAVNLRSQAEHDADHLRV
TAERESKAQRKELLLEAKEKARKYREDIEEEFKSERQELKQMENRLTERATSLDRKDENL
SSKELALEKKEQSLADKSKHLNEREENVTQLEAEKQAELERIGQMTIAEAREVILTETEN
NLTHEIATRIKDAEAQIKDTVDKKAKNLLAQAMQRLSGDYVTEQTVTTVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIKDGRIHPARIE
ELVEKSRKEMDNRIREYGEEAAYEIGAMNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGIMASELGENVALARRAGFLHDMGKAIDKEVEGSHVEIGTEFARKYKEHPVVVNAIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESVENYVKRLRDLEEIASSFDGVQTSFALQ
AGREIRIMVHPNKISDDEVTILSHKIREQIEKNLDYPGNIKVTVIREFRAVDYAK
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgataaacatgataattttagttgtctttgcactcattggtttagtcgttggatattca
gcaatttctatcaaacttagcaaagctaaggaacaagcagaaactatcttgctaaaggca
gaacaagacgctgtgaatcttcgtagtcaggcagaacatgatgcagatcatctacgtgta
actgctgaacgcgaaagtaaggctcaacgtaaagagctcttgttagaggcaaaagagaaa
gctagaaaatatcgagaagatattgaagaagaattcaaatctgaacgtcaagagcttaaa
caaatggagaatcgtttaacagaacgtgcaaccagccttgatcgtaaggatgaaaatcta
tcaagtaaagaactcgccctcgagaaaaaagagcagagtcttgctgacaaatctaaacat
cttaatgagcgtgaagagaatgtgactcagttggaggctgagaagcaagctgaacttgaa
cgtattggtcaaatgaccattgcagaggcgcgtgaggtaatcttaacagagactgaaaat
aatcttactcatgagattgcaacacgtatcaaagatgcagaagcacagatcaaagatact
gttgataagaaggccaaaaacttgttggcgcaagctatgcaacgtttgtctggggattat
gttactgaacaaaccgtaaccactgttcacctcccagatgataatatgaaaggtcgtatc
attggtcgtgaggggcgtaacattcgtacccttgaaagcttaacaggtattgatgttatc
atcgatgatactccagaagtggttgttctttctggttttgatccaatccgtcgtgagatt
gctcgcatgactctcgaagccttgattaaggatggacgtatccatccagctcgtattgag
gagttggttgagaagagtcgtaaggaaatggataaccgtatccgcgaatatggtgaagag
gcagcttacgaaattggggctatgaatctccaccctgacctaatcaagattatgggacga
ttgcagttccgtacttcatatggtcaaaacgtacttcgtcactcagttgaagttggtaaa
ctagcaggtattatggccagtgaattgggtgagaatgtggctctagctcgtcgtgctggt
tttcttcatgatatggggaaagctattgacaaagaggtcgaaggtagtcacgttgagatt
ggtactgagtttgcacgtaagtataaagagcatccagtcgtggttaatgccattgccagc
caccatggagatgtggaacctgagagtgtgattgcagttattgtagctgcagcagatgct
ttgagttcggctcgcccaggagctcgtaatgaatccgttgagaattatgtcaaacgcctt
cgtgatttggaagagattgcatcaagctttgacggtgttcaaacaagcttcgcccttcaa
gctggtcgtgaaattcgtattatggttcatccaaataaaatctcagatgatgaagttacg
atcttgtctcacaagatacgtgaacaaattgagaaaaacttggattacccaggaaatatt
aaggttacagtcattcgtgaattccgtgcggttgactatgccaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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