KEGG   Salinispora tropica: Strop_3855
Entry
Strop_3855        CDS       T00504                                 
Name
(GenBank) protein of unknown function UPF0079
  KO
K06925  tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
Organism
stp  Salinispora tropica
Brite
KEGG Orthology (KO) [BR:stp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:stp03016]
    Strop_3855
Transfer RNA biogenesis [BR:stp03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Strop_3855
SSDB
Motif
Pfam: TsaE AAA_25 RuvB_N AAA_29 AAA_16 ABC_tran AAA_7 cobW TIP49
Other DBs
NCBI-ProteinID: ABP56285
UniProt: A4XBH8
Position
complement(4413743..4414252)
AA seq 169 aa
MNPGGPIRFTLPTVADTHAFGRRLAGLLQAGDLLLLTGPLGAGKTALTQGIGAGLGVTGA
VTSPTFVIARVHQPDPARGGSVALVHADAYRLGDATDPRAEIDDLDLDASVDEAVTVVEW
GEGLAEQLVAAHLWVRIDRREDDTRLVDLEPVGGDWRARLTGTPGFIDS
NT seq 510 nt   +upstreamnt  +downstreamnt
gtgaacccagggggaccgatccgtttcacgctgccaaccgtcgccgacacgcacgccttc
ggccgccggctggccggcctcctacaggcgggggacctcctgctgctgaccggtcccctc
ggggccggcaagacggctctcacccagggcatcggcgccgggctgggggtgactggggcg
gtcacctcacccaccttcgtgatcgcgcgagtacaccagcccgatccggcccggggcggt
tcggtggccctcgtgcacgccgacgcgtaccgcctgggcgatgcgaccgatccccgcgcc
gagatcgacgacctggacctggacgcgtcggtggacgaggcggtgaccgtggtcgagtgg
ggcgaagggctcgccgagcagctcgtcgcggcgcacctgtgggtccggatcgaccgccgg
gaggacgacacccggttggtcgacctggaacccgtcggtggcgactggagggcgcggttg
actggtacccccggattcatcgacagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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