KEGG T04265: ASR50

Streptomyces sp. 4F: ASR50_15185

Entry

ASR50_15185       CDS       T04265

Name

(GenBank) endonuclease III

K10773

endonuclease III [EC:3.2.2.- 4.2.99.18]

Organism

strf Streptomyces sp. 4F

Pathway

strf03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:strf00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ASR50_15185
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strf03400]
    ASR50_15185
Enzymes [BR:strf01000]
4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ASR50_15185
DNA repair and recombination proteins [BR:strf03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ASR50_15185
Prokaryotic type
     ASR50_15185

SSDB

Motif

Pfam:

HhH-GPD HHH HC2 EndIII_4Fe-2S RecR_HhH

Other DBs

NCBI-ProteinID:

ALV50622

Position

complement(3445997..3447181)

AA seq 394 aa
MGEQVSDGGRKTAKAARTAAAAGPASAKKAAPARKTPAKKATAEKATAEKAAEKKATAEK
ATAKKSAGKKAAADKAAPARKPAAKKASARSAKKAAPAKSSAALKKAPAPRKQVVAPKKA
TASVPAAPAKTVAAHPQGESRTALVRRARRINRELAEVYPYAHPELDFENPFQLVVATVL
SAQTTDLRVNQTTPALFAKYPAPEDLAAADPEEVEEILRPTGFFRAKTKSVIGLSKALVE
QFGGEVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWKWTDETDPDK
IEAAVGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGEGETDPEKAKK
LLKYEKAGQPGQRLKPPQAYLDAGGRPAPPLGAG

NT seq 1185 nt +upstreamnt +downstreamnt
gtgggcgaacaggtctccgatggcggtaggaagacggcgaaagccgcgaggacggctgcc
gccgcggggcccgcctccgcgaagaaggccgcacctgcgcggaagacgcctgcgaagaag
gccacggcggagaaggccacggcggagaaggccgcggagaagaaggccacggcggagaag
gccacggcgaagaagtccgccgggaagaaggccgcagccgacaaggccgctcccgcccgg
aagcccgcagcgaagaaggcgtccgccaggtccgccaagaaggccgcccccgccaagtcg
tccgccgctctcaagaaggctcccgcccccaggaagcaggtcgtcgcgccgaaaaaggcg
accgcctccgttccggccgccccggcgaagacggtcgccgcgcacccgcagggcgagtcc
cgcaccgcgctggtgcgcagggcccgccgtatcaatcgcgagctcgccgaggtctacccg
tacgcccaccccgagctggacttcgagaaccccttccaactcgtcgtcgccaccgtgctg
tcggcccagaccaccgacctgcgcgtcaaccagacgacgcccgcgctgttcgcgaagtac
cccgcccccgaggacctggcggccgccgacccggaggaggtggaggagatcctccgcccc
accggcttcttccgcgccaagaccaagtccgtcatcggtctgtcgaaggcgctggtggag
cagttcggcggggaggtgccgggccggctggaggacctggtcaagctgcccggcgtgggc
cgcaagaccgcgttcgtcgtgctcggcaacgcgttcggccgccccggcatcacggtcgac
actcacttccagcgcctggtgcgccgctggaagtggaccgacgagaccgacccggacaag
atcgaggcggcggtcggcgcgctgttcccgaagagcgactggaccgacctctcccaccac
gtcatctggcacggccgccgcatctgccacgcccgcaagcccgcctgcggcgcctgcccg
atcgccccgctctgcccggcgtacggcgagggcgagacggacccggagaaggcgaagaag
ctgctgaagtacgagaaggccggccagccgggccagcggctgaagcccccgcaggcgtat
ctggacgccggaggcagaccggccccgccgctgggggccggatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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