KEGG   Shewanella violacea: SVI_3166
Entry
SVI_3166          CDS       T01206                                 
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
svo  Shewanella violacea
Pathway
svo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:svo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SVI_3166 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svo03400]
    SVI_3166 (mutS)
DNA repair and recombination proteins [BR:svo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     SVI_3166 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-ProteinID: BAJ03137
UniProt: D4ZAU2
Position
3588018..3590585
AA seq 855 aa
MNPIDTQNLEKHTPMMRQYLTLKAENPEMLLFYRMGDFYELFYDDAKRASELLGISLTAR
GKSGGDPIPMAGLPYHAVEGYLAKLVQLRVSVAICEQIGDPATSKGPVERKVVRLVTPGT
LTDEALLQERQDNLLAAVYHGKAGFGYATLDLSSGRFVVSELESREALEAELQRTSPAEL
LYSEDFSEMSLITRFNGKRRRPEWEFDFDTSRKLLLDQFKTKDLRGFGLENARLSLQAAG
CLMQYVKDTQRTALPHINSIVRFNQDDSIVLDAATRRNLELTINLQGGRENTLSAILDNT
TTPMGSRMLQRWLHEPLRDRQQIESRLGALTELLDSGLFDNLTPHLKALGDIERITARLA
LRSARPRDFSRLKQALSVLPEIQQLLASCQSPHLKRLATIMSEFPDELALLDRAIIDNPP
MLIRDGGVLRDGYNEELDQWRALSKGATDYLKELEAREKESTGISTLKVGYNRVHGYYIE
VSRRESDLVPLSYQRRQTLKNTERYIVAELKEHEEKVLSSQGKALALEKQLWEQLFDLIL
PKLHELQLFAQGAAELDVISNFAERAETLNYRCPTLTDISGIHIESGRHPVVEQVSQSPF
IANPVTLNSTRKMLIVTGPNMGGKSTYMRQVALITLMAHIGSYVPAQEAVIGPVDRIFTR
IGASDDLASGRSTFMVEMTETANILHNATTQSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
EKIGAMTLFATHYFELTQLPDLIDNVENVHLDAIEHGDTIVFMHAVQEGAASKSYGLQVA
ALAGVPARVIAAAKHKLHHLESRDSKDANHEPSQQTMVFPEQKISQVEDALQSINPDDLS
PKQALEILYRLKQLT
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgaatccaatcgacacccaaaacctagaaaaacacacacctatgatgcgtcaatacttg
acgctcaaggccgaaaaccctgaaatgttattattttaccgtatgggtgacttctacgag
ctcttctatgacgatgcaaagagagcatctgaactcttaggcatttcactcaccgcacgt
ggcaagagtggtggcgatccaatccctatggctggactgccctatcacgcagtcgaaggt
tatctcgccaagctggttcaacttagggtctctgtcgccatctgtgaacagatcggcgat
ccagccacctctaaggggccggttgaacgcaaggtcgttcgtctcgtcacaccaggaacc
ttgaccgacgaagccttactgcaagagaggcaagataacctgcttgctgctgtatatcat
ggtaaggcaggctttggttatgccaccttagacttaagctctggccgtttcgtggtcagt
gaattggagagcagagaagcattagaggctgagctacaacgtactagtccagccgagtta
ctctatagtgaagacttcagcgagatgtccctgatcacaagattcaatggcaagcgcaga
cgcccggaatgggaattcgatttcgacacttcccgtaaactccttttagatcaatttaag
accaaagatctacgtggtttcggcctggaaaatgcgcgtttatcgctgcaggcggctggt
tgcctgatgcagtatgttaaagatactcaaagaactgccctgccccacatcaactctatc
gtacgattcaatcaagacgacagtatcgtgctcgatgccgccacaagaagaaacttagag
ctgacaatcaacctacaaggtggacgtgaaaataccctatctgcgatattagataatacg
acaacccctatgggcagtcgcatgttgcagcgctggctccacgaacctttgagagatcgc
caacaaatagaatctcgtttaggtgccctcaccgagttgctcgacagcggcctgtttgac
aacctgactccacatttaaaagcactaggtgatatagaacgaatcaccgccagactcgca
ctgagaagtgccagacccagggatttttctcgcctaaaacaggcattatcagtactgcca
gagattcagcaacttctcgccagttgccagtcaccacatctcaaacgtctagcgacgatt
atgagtgaattccccgatgaactcgctctgctcgacagggcaattatagataatccacct
atgctaatccgcgatggtggagtcctaagagatggttacaatgaggagcttgatcagtgg
cgcgccttgagcaagggggcaacggattaccttaaagaattagaggctcgcgagaaagag
tcaaccggtatctctacccttaaagtcggctataaccgagttcacggttactatatcgaa
gtcagtcgccgggaatctgatcttgtgcctctgagttatcagcgcagacagaccctaaag
aataccgaacgttacatagttgccgaattgaaagaacatgaagagaaggtactctccagt
caaggcaaggctctggcactggaaaagcaactttgggagcagttattcgatcttatttta
ccaaaacttcatgagttacaactattcgctcagggcgcagcagagctggatgtcattagc
aattttgccgagcgcgccgagaccctgaactatcgctgcccgacactcactgacatctca
ggtatacatatagaatcgggccgtcatcctgtggttgagcaagtgagtcaaagccccttc
atcgccaatcccgtgaccttaaattcgacacgaaaaatgctaatcgtcactgggccaaac
atgggcggtaagtctacctatatgaggcaagttgccttaatcacccttatggcgcacatt
ggctcctatgttccggcccaagaggctgtcataggtccagtggatcgcatttttactcga
ataggtgcatcggatgatctcgcttctggccgctcaaccttcatggtcgaaatgacagaa
acagcaaatattcttcataatgccacgactcaaagtctggtattaatggatgaaattggt
cgaggaacatccacatacgatggactatcactggcctggtccgctgccgaatacctggca
gagaaaataggagccatgacactgtttgcaacccactatttcgagctcactcagctacct
gatctcatcgacaatgtagaaaatgtccatcttgatgccatagaacatggagataccata
gtcttcatgcatgcggtacaagaaggcgccgcaagtaagagctacggcttgcaggttgcc
gctctagctggagtacccgctagagtcatagcagcagcaaaacataaactgcatcactta
gagagccgtgatagcaaggacgccaaccatgagccatcgcagcaaactatggtctttcct
gagcaaaaaatatcgcaagtggaagatgctctccaaagtattaaccctgatgacctcagc
ccgaaacaagccttagagatattgtacaggctcaaacaactgacttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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