KEGG   Streptomyces violaceoruber: B1H20_27130
Entry
B1H20_27130       CDS       T05124                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
svu  Streptomyces violaceoruber
Pathway
svu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:svu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B1H20_27130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svu03019]
    B1H20_27130
   03016 Transfer RNA biogenesis [BR:svu03016]
    B1H20_27130
Enzymes [BR:svu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     B1H20_27130
Messenger RNA biogenesis [BR:svu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     B1H20_27130
Transfer RNA biogenesis [BR:svu03016]
 Prokaryotic type
  tRNA degradation factors
   B1H20_27130
SSDB
Motif
Pfam: RNase_PH PNPase KH_1 S1 RNase_PH_C KH_2 KhpA-B_KH PCB_OB Cauli_AT
Other DBs
NCBI-ProteinID: ARF64660
UniProt: A0A1V0UHV5
Position
6193027..6195240
AA seq 737 aa
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKDN
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETVMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEIVAAGLEAAKPFIKTLC
KAQADLASKAAKPEGDFPVFLDYQDDVLDALAKAVTPELKQALTIAGKQERETELDRVKE
IAAEKLLPEFEGREKEISAAYRALTKKLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEEDEKKDDTDK
NT seq 2214 nt   +upstreamnt  +downstreamnt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcaccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttccaagcggcccaaggacaac
ctcgacttcttccccctcacggtggacgtcgaggagcggcagtacgcggccggcaagatc
cccggctccttcttccgccgcgagggccgcccctccgaggacgccatcctcacctgccgt
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacggtcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcc
gcctcctgctccacccagctcgcgggcctgcccttctccggcccgatcggcgccacccgc
gtcgccctgatcaagggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtcaaggacggcgccgaggctccc
accgaggagatcgtcgccgccggtctggaagcggcgaagcccttcatcaagaccctctgc
aaggcgcaggccgacctggcgtccaaggccgccaagcccgagggcgatttcccggtcttc
ctggactaccaggacgacgtcctcgacgccctcgccaaggccgtcacgcccgagctgaag
caggcgctcaccatcgccggcaagcaggagcgcgagaccgagctggaccgcgtcaaggag
atcgccgccgagaagctcctcccggagttcgagggccgcgagaaggaaatctccgccgcg
taccgcgcgctgaccaagaagctggtccgcgagcgcgtcatcaaggacaaggttcgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgccatcgtgccggtcctcccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctcaaccatgtcgctgctgaacgccggtgtgccc
ctcaaggccgccgtcgccggtatcgccatgggcctgatctcgcaggagatcgacggcaag
acccactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaagcagttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcccgtctgcac
atcctggacgtcatgaacgaggccatcgacgtcccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
acgatctacatcggtgcgcagcagggctcgcaggccgaggccgcccgcgccacgatcaac
gccatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtctcgctcatgccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtcgagaacgtcgaggacgtgctcggc
gtcggcgccaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctc
atccccgtcatcgagggtgaagaggacgagaagaaggacgacaccgacaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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