KEGG   Synechococcus elongatus PCC7942: Synpcc7942_1047
Entry
Synpcc7942_1047   CDS       T00300                                 
Name
(GenBank) phycocyanin, beta subunit
  KO
K02285  phycocyanin beta chain
Organism
syf  Synechococcus elongatus PCC7942
Pathway
syf00196  Photosynthesis - antenna proteins
syf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:syf00001]
 09100 Metabolism
  09102 Energy metabolism
   00196 Photosynthesis - antenna proteins
    Synpcc7942_1047
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:syf00194]
    Synpcc7942_1047
Photosynthesis proteins [BR:syf00194]
 Antenna proteins
  Phycobilisome - Cyanobacteria, Red alga [OT]
   Phycocyanin (PC)
    Synpcc7942_1047
SSDB
Motif
Pfam: Phycobilisome DUF6374 TetR_C_35
Other DBs
NCBI-ProteinID: ABB57077
CyanoBase: Synpcc7942_1047
UniProt: P06539
Structure
Position
1060318..1060839
AA seq 173 aa
MTFDAFTKVVAQADARGEFLSDAQLDALSRLVAEGNKRIDTVNRITGNASSIVANAARAL
FAEQPSLIAPGGNAYTNRRMAACLRDMEIILRYVTYAVFTGDASILDDRCLNGLRETYLA
LGVPGASVAEGVRKMKDAAVAIVSDRNGITQGDCSAIISELGSYFDKAAAAVA
NT seq 522 nt   +upstreamnt  +downstreamnt
atgacttttgatgctttcaccaaggtggtggcacaagccgatgcccgtggcgaatttttg
agcgacgcccaactggacgcgctgagccgcttggttgcagaaggcaacaaacggattgat
acggtcaaccgcatcaccggtaatgcttcgtcgatcgtcgctaacgcagcgcgtgcattg
tttgcagagcaaccttctctgattgctcctggcggcaacgcatacacgaaccgtcggatg
gcggcttgtctgcgcgacatggaaatcattctccgctacgtgacctacgcggtcttcacc
ggcgatgcttccattctcgacgaccgctgtttgaacggtctgcgtgagacctacttggct
ctgggcgtgcccggtgcatcggtggcagaaggcgttcgcaagatgaaagacgcagctgtg
gcgattgtgagcgaccgcaacggcatcacccaaggtgactgttcagcgatcatttccgag
ctgggcagctacttcgacaaagctgctgctgcagttgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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