KEGG   Synechococcus sp. WH 8103: SynWH8103_02155
Entry
SynWH8103_02155   CDS       T04859                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
synw  Synechococcus sp. WH 8103
Pathway
synw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:synw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SynWH8103_02155 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:synw03019]
    SynWH8103_02155 (pnp)
   03016 Transfer RNA biogenesis [BR:synw03016]
    SynWH8103_02155 (pnp)
Enzymes [BR:synw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SynWH8103_02155 (pnp)
Messenger RNA biogenesis [BR:synw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SynWH8103_02155 (pnp)
Transfer RNA biogenesis [BR:synw03016]
 Prokaryotic type
  tRNA degradation factors
   SynWH8103_02155 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KhpA-B_KH PCB_OB
Other DBs
NCBI-ProteinID: CRY92870
Position
1769340..1771505
AA seq 721 aa
MQGQTQSISFDGREIRLTTGRFAPQAGGSVLVECGDTAVLVTATRSGGREGIDFLPLICD
YEERLYAAGRIPGSYQRREGRPPERATLTARLIDRPMRPLFPGWLRDDLQVVATCLSLDE
RVPADVLAVTGASIATLLAGIPFNGPMAAVRVGLLGDDFVLNPSYREIERGDLDLIVAGT
PDGVVMVEAGGNQLPEQDVIEAIDFGYEAICELIKAQEQLLKDLGIEQVKPETPKQDTTV
PAYLEKQCTKAISEVLKKFDQTKDERDKALDAIKAEAAEAIAGLKEDDAIRVATASNSKL
LGNSFKALTKTLMRQQILKDGKRVDGRALDEVRAISALAGVLPRRVHGSGLFQRGLTQVL
STATLGTPSDAQEMDDLHPSTEKLYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERAI
LPVLPAKDTFPYVVRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPLKAPVSGAAMGLIKE
GDDIRILTDIQGIEDFLGDMDFKVAGSEKGITALQMDMKITGLPVKTIAEAINQARPARL
HILEKMLEAIDTPREGLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
SGIVTIASHDGAAADEAQKIIEGLTRKVNEGEVFSGSITRIIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVKVGDEVTVRVREIDNRGRINLTLRGVPQSGDGAGEEPQPTPVAPL
S
NT seq 2166 nt   +upstreamnt  +downstreamnt
gtgcaaggacaaacccagtcgatctcctttgatggacgcgagattcgactgaccaccgga
cgttttgccccccaggcgggcggatccgttcttgttgaatgcggagacaccgccgtgctg
gtgaccgccacccgctccggcggacgggagggcatcgattttctgcctctgatctgcgat
tacgaggagcggctctacgccgctggtcggatccccggcagctaccagcggcgtgagggt
cgtccccccgagcgggccaccctcaccgcccgtctgatcgaccggccgatgcggcccctg
ttcccaggttggctgcgggacgaccttcaggtggtcgccacctgtctgtccctggacgaa
cgtgtcccggcggatgtgcttgccgtgaccggtgcctccatcgccacgctgctggcgggc
attcccttcaatggtccgatggcggccgtgcgggtgggcctgctcggcgatgacttcgtg
ctcaacccgagttatcgcgaaattgaacgcggggatctcgatctgatcgtcgccggcacc
ccggatggtgtggtgatggtggaggctggtggcaaccagctacccgaacaggatgtgatc
gaagcgatcgacttcggttacgaagcgatctgcgaattgatcaaagcccaggagcaactg
ctgaaggatctgggcatcgaacaggtgaagccggagacccccaagcaggacaccacagtg
ccggcttacctggagaagcagtgcaccaaggcgatcagcgaggtgctcaagaaattcgac
cagaccaaggatgagcgcgacaaggcccttgatgcgatcaaggcggaagccgctgaagcc
atcgccggcctgaaggaggacgatgccatccgtgtggccaccgcctccaattcgaagctg
ctcggtaacagcttcaaggcgctgaccaaaaccctgatgcgccagcagatcctcaaagac
ggcaagcgagtggacggtcgcgccctggatgaggtgcgggccatcagtgccttggctggg
gtcctccctcgacgggtccatggttccggcctattccagcgtggtctcacccaggtgctc
tccaccgccaccctgggcacacccagcgatgcccaggagatggatgacctccatcccagc
accgagaagctgtacctgcaccactacaacttcccgccttattccgtcggcgaaacccga
ccgatgcgctccccaggacgccgcgaaattggtcatggcgccttggccgaacgggccatc
ctgccggtgcttcccgccaaggacaccttcccttacgtggtgcgggtggtgagtgaagta
ctcagttccaacggctctacctcgatgggctccgtctgcggcagcaccctgtcgctgatg
gatgccggagtccccctcaaggcaccagtgagcggtgcggccatgggcttgatcaaggag
ggcgatgacatccgcatcctcacggacatccagggaatcgaagatttcctcggcgacatg
gatttcaaagtcgctggcagcgagaagggcatcacggccctgcagatggacatgaagatc
accggtctgccggtgaagacgatcgccgaggcgatcaaccaggcccgtccagcccgtctg
cacatccttgaaaagatgctggaggcgatcgacacaccacgcgaaggcctgtccccccat
gccccgcgcctgctgagcttccggatcgatcccgagctgattggcacggtgatcggtccc
ggcggccgcacgatcaaaggcatcaccgagcgcaccaacaccaagatcgacatcgaggac
agcggaatcgtcaccatcgcctcccatgacggtgcggcggctgatgaagctcagaagatc
atcgaaggcctcacccgcaaggtgaatgaaggcgaggtgttctcaggatcgatcacccgg
atcatccccatcggtgccttcgtcgagatcctgcctggcaaggaaggcatgatccacatt
tctcaactctccgaagccagggtggagaaggtggaggacgtcgtgaaggtgggtgacgag
gtcaccgtgcgtgttcgggaaatcgacaaccgcggccggatcaacctcaccctgcggggc
gtgccccagagcggcgacggtgccggggaggagcctcagcccacccctgtggcaccgctg
agctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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