KEGG   Tamlana carrageenivorans: C1A40_02695
Entry
C1A40_02695       CDS       T05295                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
taj  Tamlana carrageenivorans
Pathway
taj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:taj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1A40_02695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taj03019]
    C1A40_02695
Enzymes [BR:taj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     C1A40_02695
Messenger RNA biogenesis [BR:taj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     C1A40_02695
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UvrD-helicase AAA_19 P-loop_SecA AAA_22 Shikimate_DH
Other DBs
NCBI-ProteinID: AUS04446
UniProt: A0A2I7SEX0
Position
complement(598093..599397)
AA seq 434 aa
MSFQSLGLSEALLKAISKKGYTTPSPIQEKAIPPVLEGHDVLASAQTGTGKTAGFTLPLL
HLLSENPKEKYKPIRALILTPTRELAAQVYANVREYSEFLNLRSAVIFGGVNQKPQAATI
RQGVDILVATPGRLLDLQNQGLLSLKRVEIFVLDEADRMLDMGFLRDIEKVIKMMPEKRQ
NLMFSATFSKDIKKLAHGILNQPVQVEATPENTTVEAINQKVYRVAKGLKTGLIIKLIND
GNWKQVLVFTRTKHGANKLCEKMDKAGITAAAIHGNKSQGARTKALSGFKSGRVRVLVAT
DIAARGLDIPLLPHVINFELPNVSEDYVHRIGRTGRAGAKGEAISLVSADETTFLRDIEK
LIELKLPVDIVEGFEPDPNASTVPVKPGQGRQNRRPQKSKSNKPNNSGGSGEGSRRNSGR
NNKSRRPKRSNEGR
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgtcatttcaatctttgggactgtctgaagccctgctaaaagccattagcaaaaaagga
tacacaacaccatctccaattcaagaaaaagccatcccacccgtattagagggacacgat
gttttagcatcggcacaaacaggaacaggaaaaacagctggttttactttaccactatta
catttgctttctgaaaatccgaaggaaaaatacaagcccattcgagctttaattttaacg
cctacgcgggaattggcagcacaagtttatgcgaatgttagagagtatagcgagttttta
aatttacgtagtgccgttatttttggaggtgttaaccaaaaacctcaagctgcaactatt
cgtcagggggttgatattttagtagctactcctgggcgtttactagatttacaaaaccaa
ggtttattatcgttaaaacgtgtagaaatttttgttttagatgaagccgaccgtatgttg
gatatgggctttttaagagatatagaaaaagtgattaaaatgatgccagagaaacgtcag
aatttgatgttttcggcaaccttttcaaaggatattaaaaaacttgctcatggtatttta
aatcagccagtacaagttgaagccacaccagaaaacacaacggttgaagcgattaatcaa
aaggtttaccgtgttgcaaaaggtttaaaaacaggcttgattattaaattaattaacgat
ggtaattggaaacaagtccttgtttttaccagaacaaaacatggggccaataaattatgt
gagaaaatggataaggctggaataactgcagctgccattcacggaaataagagtcagggt
gcgagaaccaaagccttatcaggatttaaatcgggccgtgttcgtgttttggttgctacc
gatattgctgctagaggacttgatattccgttattaccacacgtgattaactttgagttg
cctaatgtttctgaagattatgtacaccgcattggtagaacaggaagagctggagctaaa
ggtgaagctatttctttagtgagtgccgatgaaaccacttttttacgtgatatcgaaaaa
ctgatagagttaaagcttccggtagacattgttgaaggtttcgagcctgatcctaatgca
tcaacggtacctgtaaaaccaggtcagggcagacaaaaccgaagacctcaaaaaagtaaa
tctaataaaccgaataactctggaggatctggagaggggtcacgaagaaattctggaaga
aataataaatccagacgcccaaaaagaagtaacgaagggaggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (43)   

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