KEGG   Theobroma cacao (cacao): 18589619
Entry
18589619          CDS       T02994                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18589619
   03041 Spliceosome [BR:tcc03041]
    18589619
   03036 Chromosome and associated proteins [BR:tcc03036]
    18589619
Enzymes [BR:tcc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     18589619
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     18589619
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18589619
Spliceosome [BR:tcc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    18589619
Chromosome and associated proteins [BR:tcc03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    18589619
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 18589619
NCBI-ProteinID: XP_007014728
UniProt: A0A061GT54
Position
9:23889018..23895419
AA seq 622 aa
MTTRTSWADLAANSAAENVGVGSSSASNGAVGTTSAAGRPVYVPPHLRNRPSSSDPPAPT
STGAASSNDRPGYGGSRWAAPRTDYYNRSGYSGGGGGGGGRPGGWGGRSGGWDRGRDREV
NPFGNDDDTEQVFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNLNIRR
CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQVPQRPLRGART
VYPLALILSPTRELSMQIHEEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATP
GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSAT
FPKEIQRLACDFLANYVFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGVQ
GKQALTLVFVETKKGADSLEHWLCMNGFPATTIHGDRSQQEREQALRSFKSGATPILVAT
DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNASLARPLAD
LMQEANQEVPAWLTRYAARSFGGRNRRPGGGRFGGRDFRRDSSFNRGNLDYYGGGNSAGG
YAASGGYGGGSGYGPGVTSAWD
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgactacacgaacatcatgggcagatttggctgcgaattctgcagccgagaatgtaggt
gttggttcttcctctgctagcaatggagctgttggtaccacctcagctgctggccgacct
gtttatgttcctccacatctccgtaataggccatcttcttcagacccgcctgctcctact
tccactggtgctgcatcaagtaatgaccgacctggatatggcggatcccgttgggctgct
cctaggactgattattacaaccgatcagggtacagtggtggtggtggtggtggtggtggt
cgacctggtggatggggtggcagaagtggtggttgggatcgtgggagagacagggaagtt
aatccatttggaaatgatgatgatacagagcaggtgtttagtgagcaagagaatactggg
attaactttgatgcttatgaagacattcctgttgagactagtggtgataacgtgccacca
cctgtcaatacttttgcagagattgacttgggtgaagcacttaacctaaacattcgtagg
tgcaagtatgtgaagccgacacctgttcaaaggcatgccatccccatttcacttgctggg
cgggatttgatggcatgtgcacagactggttctggaaagacagctgccttttgttttcca
attatcagtggaattatgagaggccaggttccacaaagacccttacgtggggcgcgtact
gtatacccactagctcttattctctctcctaccagggagctctcaatgcaaatacatgag
gaagccaagaagttctcttatcaaacaggtgttaaggtggttgttgcttatgggggtgcc
cctattaaccaacagctgagggagctggagagaggtgttgatattctcgtggcaactcct
ggaagattggtagacttgctagagagggctagagtttctctacagatgatcaggtactta
gcccttgatgaagcagacagaatgctggacatgggttttgagcctcaaataagaaaaatt
gtggaacaaatggacatgccccctcctggtgttagacaaacaatgctattcagtgccacc
tttccaaaagagatacagagactggcctgtgattttcttgcaaattatgttttcttggcg
gtgggacgagttggatcaagtactgatttgattgtccagagagtagaatttgttcatgag
tcagacaaaagaagtcaccttatggatcttcttcatgcgcagagggcaaatggtgtccag
ggaaagcaagctcttacattagtttttgttgagacaaaaaagggagctgattcactggaa
cattggttgtgcatgaatggttttcctgcaactaccattcatggtgatagatcccagcag
gaaagagaacaagcattacggtcatttaaaagtggtgctaccccaatcttggtagcaact
gatgtggcagcccgtggtcttgatattcctcatgttgcacatgtggtgaactttgacctt
ccaaatgatattgatgactacgttcatcgaattggacggacagggcgtgcaggcaaaact
ggtttagccacagccttcttcaatgataacaatgcttctttggcaaggccattagcagat
ctaatgcaagaagcaaatcaagaggtgcctgcttggctgacccgatatgctgctcgttcg
tttggggggcggaaccgacgtcctgggggaggccgctttggtgggcgtgactttcgaagg
gactcatctttcaacaggggtaatttagactactatggtgggggcaacagtgctggtggg
tatgctgcttctggcgggtatggtggtggcagcggctacggtccaggtgttaccagtgca
tgggattga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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