KEGG   Tatumella citrea: A7K98_20085
Entry
A7K98_20085       CDS       T04873                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tci  Tatumella citrea
Pathway
tci03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A7K98_20085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tci03400]
    A7K98_20085
Enzymes [BR:tci01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     A7K98_20085
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A7K98_20085
DNA repair and recombination proteins [BR:tci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A7K98_20085
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N RNHCP
Other DBs
NCBI-ProteinID: ARU95807
UniProt: A0A1Y0LD39
Position
complement(4281544..4282353)
AA seq 269 aa
MPELPEVETSRRGIEPHLVGATVLHAVVRNPRLRWPVSPEILSLSDQPVLSVQRRAKYLL
LELPQGWIIIHLGMSGSLRVLAEELPAEKHDHVDLVLSNGKVLRYTDPRRFGAWLWETDL
ASSRVLAHLGPEPLSDEFSARWLQEKSQRKRIPVKQWLMDNKLVVGVGNIYASESLFAAG
ILPDRLACQLSEEDAQRLVKCIKQVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRHCGTAIQSGRHGQRSTYWCPQCQK
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaaaccagtcgccgtggtatagaaccacacctggtcggt
gccacggtattacatgcagtggtgcgtaacccacggttgcgttggccagtatcgccggaa
atcctgtcattaagcgatcagccagtgttaagcgtgcaacgacgcgcaaaatacctgctg
ctggagctgccacagggatggattatcatccatctgggcatgtcaggcagcctgagagtg
ttggcagaagagctacctgcagagaagcacgatcatgttgatttggttctgagcaatggg
aaagtgctgcgttataccgatccccggcgatttggtgcctggttatgggaaacggattta
gcttccagccgtgtgcttgcacatctgggaccggaacccctgagtgatgagttttctgcc
cggtggttacaggaaaaatcacagcgtaagcgtattcctgtcaaacaatggctgatggat
aacaagctggtggttggggttgggaatatctatgccagcgaatcgttgtttgctgccgga
attttgcctgacaggctggcctgccagttgagcgaagaagatgcacaacggctggtgaaa
tgcattaagcaggtactgcaacgttcaatcgagcagggcgggaccacattacgggacttt
ttgcaaagtgatggcaagcccggatatttcgcccaggaacttcaggtttatggtcgggca
ggcgaaccatgccggcattgcggtacggccattcaaagtggcagacatggacaacgcagt
acttactggtgccctcagtgtcagaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system