KEGG   Taylorella equigenitalis 14/56: KUK_0342
Entry
KUK_0342          CDS       T02604                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
teg  Taylorella equigenitalis 14/56
Pathway
teg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:teg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KUK_0342 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:teg03400]
    KUK_0342 (uvrA)
DNA repair and recombination proteins [BR:teg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KUK_0342 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KUK_0342 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_inter AAA_29 SMC_N AAA_16 nSTAND1 AAA_21 RsgA_GTPase UvrA_DNA-bind nSTAND3 AAA_22 AAA_18 Viral_helicase1 AAA_15 NACHT ATPase AAA_33 cobW DnaJ_CXXCXGXG DUF4350 AAA_23 T2SSE PRK DpnD-PcfM
Other DBs
NCBI-ProteinID: CCG17656
UniProt: I7IY90
Position
complement(377956..383526)
AA seq 1856 aa
MTSKIQIFGAKQNHLKNLDVQINTGEITVITGVSGSGKSSLAFDTLYAEGQRKYVETFSP
YARQFLDRMDKPQVERIEGILPAIAINQTNPVRNSRSSVGTMTELNDLIKLLYHHAGILH
CRCCGRVVERFNAESILKNLSKNIRSNESKLVVTFAVKIPKNFTQDEIEQYLSHQGYGRI
QREQSLEDDSGEKTLFVIQDRFKLARVAKSRVYEAIETASRFGHGKIYIFELFSSEDGTD
YELVHPFSDQLRCDHCNISYSEVTPSHFSFNSPAGACETCRGFGRTMGIDYNLVIPDKTK
SLAQGAIKPFQTATGKECQKELIKYASKAKVRTDIPFKDLSPTEQSWVINGDPDFAFTQK
DWRTKWYGVAAFFKHLESKSYKVHVRVLLSKYRTYNTCHFCNGSRLKPDSTLWRIGEQKG
TSIKNYDRFMPVEAKWSKKQLDDMPGLCIHDLMRLSIADLEKFFDTEKFEAPELKLVIDE
IKVRVRYLNRVGLSYLSLDRQSRTLSGGEVQRINLTTALGTSLTNTLFVLDEPSIGLHPH
DTNQIIDVMQGLKKSGNTLVVVEHDPQIMYCADRVLDMGPGPGERGGEIVFDGTPNELKN
SNSLTGKYLANVLRVEAPKPMKVSKNTPRLVLSGARANNLKNLDVEFPLNRLVCITGVSG
SGKSSLVQNVLFPALLEHFQKPNSSAGNFDSLLGAEMLSDVIMVDQSPIAKTTRSNPASH
VGAYDAIRKIFAETDMAKERGYTSGTFSFNSGNGRCPTCQGTGYEYVEMQFLSDVYLKCP
DCNGRRFKQEILENYVEHLGRKANIAEVLEMTVNEALVFFKGMREVCSRLQPLVDVGLDY
LALGQPVPTLSGGESQRLKLAGHLVKASISKAKTKGIMFLFDEPTTGLHFHDISKLMGSF
RKLLEAGHSIIIIEHNLDVIRASDWIIDLGPAGGIEGGHIVESGSPEDIKKNKKSLTGIA
LIDYEEATSAKYTNALFDKSKELKYKFETAPKEISIQNAYEHNLKNVSVKIPHNKFTVIT
GVSGSGKSTLAFDILFNEGQRRYLESLNAYARSYVQPAGKPDVDAIYGIPPTVAIEQRTS
RGGRKSTVGTMTEIHHFLRLLYQKLGTQYCPSCDVPVEAFSTEQIEEMVWSKYKNKNITF
LATLVSKRKGYYTDLAKWAKKSGFETLRVDGKEIPVHPWPRLDRYIDHTIELPVFSGKLS
TKSIFSTALETALQHGKGAFSILDKDGGQNFYSTRRACPLCNTAFPEPDPRMFSYNSSQG
WCPDCMGTGLINDIAFNEIENNESLESDAIQNVDSDYLGVCRNCNGARLNSIARAFKWKE
KSITQLSELSIDKAYDFFTAIDLDKREQTIGRDILREINSRLEFMKSVGLDYLSLNRSAP
TLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNRVLLKSLKKLESNGNTLVVVE
HDDDTIKSAEHIIDVGPGAGVRGGKIIAQGTYDEILKNKNSVTGHYLANPLKHDFSSRLD
SKSQADMLSIEGANLHNIHDIDLQIPVGCLTVVTGVSGSGKSTLAREILLTNVKEAIANI
KNPRNIEWKNIHKLDGWEKLTRVLEVDQTPIGKTPRSCPATYVGFWDEIRKLFAQSTEAK
MRGWTASRFSFNTGKGRCLICEGQGMRTVEMNFLPDVKVQCEACSGMRFNSDTLAVKVRD
KSIGDVLKMDIDEAIPFFENHPKILRPLMLLQDVGLGYLTLGQPSPTLSGGEAQRIKLVT
ELVKARMDEGVTKTGRASVRAHTLYVLDEPTVGLSMADVEKLIVVLHRLVDSGNTVVVIE
HNLDVMAEADWIVDMGPEGGDRGGRVVYSGTPSKMLKTKGHTAKVLNELKSQSRAS
NT seq 5571 nt   +upstreamnt  +downstreamnt
atgacttcaaaaattcaaatcttcggtgctaagcaaaatcatttaaaaaatctcgatgta
caaattaacactggggaaattaccgtaatcactggtgtatctggctcgggaaaaagttca
ttagctttcgatacattatacgcagaaggtcagagaaaatatgtagaaacattttcacca
tatgcccgtcagtttttggatcgcatggataaaccgcaggtggagaggattgaggggata
ttgccagccatagcgataaatcaaactaatccagttcgaaattcacgtagctcagtaggc
actatgactgagttaaatgacttaattaaattgttatatcaccatgctggaatattgcac
tgtcgttgttgtggacgagttgtagagcgatttaacgcagaatcgattttaaaaaatctt
tcaaaaaatatacgatctaatgagtcaaaattagttgtcacctttgctgtaaaaatacca
aaaaatttcacacaggatgaaattgagcaatatctttctcatcaaggttatggtcgaatt
caaagagagcaatctcttgaagatgactctggggaaaagacactttttgttatacaggat
agatttaagttagcgagagttgcaaaatcacgtgtttatgaggctattgaaactgcttct
cgttttggacatggaaaaatttatatatttgaattattttcaagtgaagatgggactgac
tatgaattagtacatccatttagcgatcaactcagatgcgaccactgcaatatatcctat
tctgaagttacaccctcacatttctctttcaattctccagctggtgcatgtgagacatgt
cgtgggtttggacgtactatgggcattgattacaacctagtaatacctgacaaaactaaa
tccctagcacaaggtgctattaagccatttcaaaccgccactggaaaagaatgccaaaag
gagctaataaaatatgcctcaaaagcaaaagtacgcaccgacatcccattcaaagactta
agcccaactgagcaatcttgggttatcaatggagatcctgattttgcctttacacaaaaa
gactggagaaccaaatggtacggcgttgccgctttctttaagcacttagagtctaaatct
tataaagtacacgtacgcgtacttctatcaaaatatcgtacatataatacctgccatttt
tgtaatggatcgagattaaaacctgattcaacgttatggagaattggcgaacaaaaaggc
acttcaataaaaaattacgatcgattcatgcctgtagaagccaagtggtctaaaaagcaa
ttggacgatatgcctggcctttgcattcatgatttaatgcgtctttccatagcggattta
gaaaaatttttcgatacagaaaaattcgaggctcctgagctcaaattagtaattgacgaa
atcaaagttagagttcgttatcttaatcgagttggtctttcctatttatctcttgaccga
caaagtcgcactctttcaggaggtgaagttcaacgaatcaatcttacaacagctttgggt
acttcccttacaaatacattgttcgtcctggatgaaccatctattggcctccaccctcat
gacacaaatcaaattatagatgttatgcaaggtcttaaaaaaagtggcaatacccttgtt
gtagtcgaacacgacccacaaataatgtattgtgctgatagagttttggatatgggaccg
gggccgggagaacgtggtggagaaattgttttcgatggcactccaaatgaattaaaaaat
tctaattctctaacaggcaaataccttgcaaatgttcttcgtgtagaagctccaaaacca
atgaaggtttctaaaaacacaccacgattagttcttagtggagcacgtgcaaataatctt
aaaaatctcgatgtggaatttccattaaatcgtttagtttgcattactggagtttcaggg
tctggcaaatcatccttggtccaaaatgtgctcttccctgcattgcttgaacatttccaa
aaaccaaattcatcagctggaaattttgattctctacttggtgcagagatgctttcagac
gtgattatggtagatcagtcacctatagcgaaaacaactcgatctaaccctgcaagtcat
gttggggcctatgatgcaattaggaaaatatttgctgagacggatatggctaaggaacgt
gggtacacttctggaacctttagttttaatagtggtaatgggcgttgtccaacatgccaa
ggcacgggctatgaatatgtagaaatgcagtttctgtcagacgtttatcttaaatgccct
gattgcaatggtaggcgttttaaacaggaaattctagaaaattatgttgaacatttaggt
cgtaaagcaaatattgccgaagtgttggaaatgacagtaaacgaggcactagtttttttc
aagggcatgcgagaagtatgttcacggttgcaacctttggtggatgttggattggattat
ttagctctgggacaacctgtacctacactttctggaggtgagtcgcaacgtttgaaatta
gcggggcatctagttaaagcctcaatttccaaagctaaaacaaaggggatcatgttttta
tttgatgagcccacaactggtttgcactttcacgatatatcaaaattaatgggttcattt
agaaaactactcgaagcaggtcattccataatcattattgaacacaacttggatgtaatc
cgtgcttccgactggataattgatttaggacctgctggtggaattgaaggtggtcatatc
gtagaatctggttcgcctgaggatataaaaaagaacaaaaaatctttaactggtattgcc
ctcattgactatgaagaagcgacatctgcaaaatacacaaatgctttgtttgataaatcc
aaagaacttaaatacaaatttgaaacagcacctaaagaaatatcaattcaaaacgcttac
gagcataatttaaaaaatgtatccgtaaaaatcccacataataaatttacagttatcaca
ggagtttctggatcaggaaaatcaactcttgcatttgatattttatttaacgagggtcaa
agaagatatttagaatccctaaatgcttacgcccgttcatatgttcaacctgcaggaaaa
cctgatgtagatgctatatacggaataccacccactgtagcaatagaacagagaacaagt
cgtggtggaagaaaatcaactgtaggtaccatgaccgaaattcaccattttttacgactt
ttatatcaaaaacttggaacccaatactgcccttcatgtgacgtgcctgtcgaagccttt
agcacagaacaaattgaagaaatggtttggtcaaaatataaaaataagaacataactttt
ctagctacattagtctccaaaagaaagggctactacacagatttagctaaatgggcaaaa
aaatcaggattcgaaactttaagagtcgatggtaaagaaattccagtacacccatggcct
agactagatagatatattgatcacacaatcgaacttccagtatttagtggaaaattaagt
acaaaatcaatattttcgactgctttggaaacggccctccagcatggcaaaggtgctttt
agtattttagataaggacggtgggcaaaatttctattcaaccagaagagcttgccctctt
tgcaataccgcattccccgaaccagaccctcgtatgttttcatataactcatcccaaggg
tggtgtcctgattgtatgggcacaggattaattaacgatattgcatttaatgaaattgag
aacaacgaatccctcgaatccgatgctatacaaaatgtagattctgattatttaggagtt
tgccgaaattgcaatggggctaggctcaatagcattgccagagcatttaaatggaaagaa
aaatcgattacgcaattaagcgaattatcgattgacaaagcttatgatttttttactgca
atagacttagataaacgtgagcaaaccattggacgtgacatattaagagaaataaattca
agattggaatttatgaaatccgtaggtttggattatctgtcgctcaacagatccgcacct
actctttctggaggtgaggctcaaaggatacgacttgctgctcaattagggtcaaatttg
caaggtgtttgttatgttttagatgaacccactattggtctacatccaagagacaaccga
gtgctattgaaatcactaaaaaaacttgagtctaatggcaatactctagtcgtcgtggaa
catgatgatgacacgataaaatccgctgaacatattatcgatgtgggacctggggcaggt
gtgcgtggagggaaaatcattgcccaaggcacatatgatgaaatattaaaaaataaaaat
tcagtaactggacattatttagcaaacccactaaaacatgatttttctagtcgcctagac
tctaagtcacaagcagatatgctttcaattgaaggtgcgaacttacacaatattcatgat
atagacctacagattcctgttggctgtttgaccgttgtaacaggagtttctggctctgga
aaatcgacacttgcacgagaaattcttttaacgaatgttaaagaagctattgccaacata
aaaaatcctagaaacattgaatggaaaaatattcataaacttgatggatgggagaaacta
acaagagttttagaagttgaccaaacgccaatcggtaagacccctcgctcttgtcctgct
acttacgttggattttgggatgaaattcgaaaactttttgctcaatctacggaagctaaa
atgcggggatggacggcttcacgtttttcctttaatacaggcaaagggcgttgcttgatt
tgtgaaggtcaaggtatgcgaactgttgaaatgaattttcttcccgacgttaaggttcaa
tgtgaggcttgtagtggaatgagatttaattctgatacgcttgcagttaaagtgcgtgat
aaaagcattggcgatgtgcttaagatggacattgatgaggcgattcctttttttgaaaat
catccaaagattttgcgtccgttaatgcttctacaggatgtggggcttggatacttaaca
ttggggcaaccgtcacctactctttcaggaggggaagctcagcgaatcaaactagttact
gaattagttaaggcacgcatggatgaaggcgttactaaaactgggagagcatctgtacgt
gcacatacattgtacgtgctagatgagccgacggttggtttatccatggctgatgttgag
aaattaattgttgtattgcaccgacttgtagatagcggaaatactgtggttgtgattgag
cataacttagatgtgatggcagaggctgattggattgtcgatatgggtcccgagggagga
gatcgtgggggtcgtgtagtttatagtgggacaccttccaaaatgctaaaaaccaaaggt
catacagccaaagttttaaatgaacttaaatcacaatcccgtgcttcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (32)   

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