KEGG   Trichodesmium erythraeum: Tery_2678
Entry
Tery_2678         CDS       T00387                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ter  Trichodesmium erythraeum
Pathway
ter03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ter00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tery_2678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ter03400]
    Tery_2678
DNA repair and recombination proteins [BR:ter03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Tery_2678
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Tery_2678
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB UVR ResIII DEAD AAA_30 AAA_22
Other DBs
NCBI-ProteinID: ABG51869
CyanoBase: Tery_2678
UniProt: Q111F5
Position
complement(4147239..4149272)
AA seq 677 aa
MKNGTINFKIIMKKFCLQAPFQPTGDQPQAIAQLTTNIQAGHNFQTLLGATGTGKTFSIA
SVIENVGRPTLVLAHNKTLAAQLCNELRDFFPDNSVEYFISYYDYYQPEAYIPVTDTYIE
KTASINDEIDMLRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKAAISLQVGEEINQR
QILRDLATVQYTRNDLNLGRGKFRVKGDVLEIGPAYEDRIIRVEFFGDEIDAIRYIDPVT
GNILQSLESLNVYPARHFVTPEERLEIACNDIEVELDERLKELEKAGKLLEAQRLEQRSR
YDIEMLREVGYCNGVENYSRHLVGRKAGEPPECLIDYFPKDWLLVIDESHVTVPQIRGMY
NGDQARKKVLVEHGFRLPSATDNRPLKSEEFWEKVNQCILVSATPGNWEIEKSEDRIVEQ
IIRPTGVVDPKIFVRPTEGQIDDLLGEIRERVKLEERVLITTLTKRMAEDLTEYLEDQSV
KVRYLHSEINSIKRIEILQGLREGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRA
ERSLIQTIGRAARHIRGQAILYADNLTDSMIKAIDETERRRGIQLAYNKMNNITPRPVVK
KQSNAILAFLDVSRRLNSQQLEEVYEQVDNLSLDDVPEWIKKLESQMKEAAKNLEFEEAA
KLRDRIKHLRDKLVGNS
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgaagaatggtacaattaattttaaaataatcatgaaaaaattttgtttgcaagctccc
tttcaacctactggtgaccaacctcaagcgatcgctcagttaactaccaatattcaagct
gggcataattttcaaaccttacttggagctactggtacaggtaagacattttctatagct
tctgtcatagaaaatgttggtagaccgacgttagttttggctcataacaaaacattggct
gctcaattatgtaatgaattaagggatttttttcctgataattctgtggaatattttatt
agttattatgactattatcaaccggaggcttatattccggtaacggatacatatatagaa
aaaacagcttctattaatgatgaaattgatatgttgcgtcactcagcaactaggtcactt
tttgaacgtcgagatgtaattgtggtagcttctattagttgtatttacggtttaggaatt
ccgtcagaatatttaaaagcagctatttctttacaagtgggagaagaaattaatcaacga
caaattttgagagatttagcaacagttcaatatactagaaatgatttgaatttaggtcga
ggaaaatttagagttaagggtgatgttttggaaatcggacctgcttatgaggatagaatt
attcgggtagaattttttggagatgaaatagatgctattcgttatattgaccctgtaact
ggaaatattctccaaagtttagagtctttaaatgtatatccggcgcgtcactttgttact
cctgaagaaagattagaaattgcttgtaatgatattgaagtagaattagatgagagatta
aaagaattagaaaaagccggaaagttgttagaagctcaacgtttagaacagcgttccaga
tacgatatagaaatgttacgggaggtgggatattgcaatggagtggaaaattattctcgg
catttagtgggtagaaaagcaggggaaccgccggaatgtttgattgattattttccgaaa
gattggttattagttattgatgaatctcatgtgactgttccccaaattcgaggaatgtat
aatggagaccaagctaggaaaaaagttttagttgaacatgggtttcgtttgcctagtgct
acggataatagacctttaaaatctgaggaattttgggaaaaggttaatcaatgtattttg
gtttctgctactcctggaaattgggaaatagaaaaatctgaggatagaattgttgagcaa
attattcgtccgactggtgttgttgatccgaaaatttttgtgcgtccgactgaaggtcaa
attgatgatttattgggtgaaattagggaacgggttaagctggaagagagggttttaatt
acgactttaactaagcggatggctgaagatttgactgaatatttagaggatcaaagtgtt
aaggttcgttatttgcattcggagattaattctattaagagaattgagattttacagggg
ttgagagagggagagtttgatgtgttaattggggtgaatttattacgggaaggtttggat
ttgccggaggtttctttggtggctattttagatgcggataaggagggatttttacgggcg
gaacgttctttaattcagactattggtagggcggcgcgtcatatccgaggtcaggctatt
ttatatgctgataatttgacggatagtatgattaaggctattgatgaaactgaaagaagg
cgaggtattcagttggcatataataagatgaataatattacgccacggcctgttgtgaaa
aaacaaagtaatgctattttggcgtttttggatgtgtcgcgccgtttaaattctcaacag
ttggaagaggtttatgaacaggtggataatttgtctttggatgatgttccggagtggatt
aaaaagttagaaagtcagatgaaggaagcggcgaaaaatttggagtttgaagaggcggct
aagttacgcgatcgcattaaacatttgcgggataagttagtcggtaattcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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