KEGG   Taeniopygia guttata (zebra finch): 100224097
Entry
100224097         CDS       T01082                                 
Symbol
MEF2D
Name
(RefSeq) myocyte-specific enhancer factor 2D isoform X1
  KO
K09262  MADS-box transcription enhancer factor 2D
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    100224097 (MEF2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tgu03000]
    100224097 (MEF2D)
   04131 Membrane trafficking [BR:tgu04131]
    100224097 (MEF2D)
Transcription factors [BR:tgu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box regulators of differentiation, MEF-2
    100224097 (MEF2D)
Membrane trafficking [BR:tgu04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    100224097 (MEF2D)
SSDB
Motif
Pfam: SRF-TF HJURP_C TFIIA FAM101 CPSF100_C Presenilin Suf Connexin EOS1 Dala_Dala_lig_N eIF-3_zeta SpoIIP PAT1 FHIPEP Rxt3 RR_TM4-6
Other DBs
NCBI-GeneID: 100224097
NCBI-ProteinID: XP_030147369
Position
25:538056..618590
AA seq 551 aa
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKG
SEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLS
PQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGLAGSVLGGHGNDSSSDSP
RPPIFGGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPAHGAQLAANSRKPDLRVITS
QSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNT
DYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
PQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPL
STFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPS
VKRMRLDTWVT
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggggagaaaaaagatccagatccagcggatcacggacgagcgcaaccggcaggtgacc
ttcaccaagcgcaagtttggcttgatgaagaaagcctatgagctgagcgtcctgtgcgac
tgcgagatcgccctcatcatcttcaaccactccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagccccacgagagccggacc
aacgcagacatcatcgagacgttaagaaagaaaggttttaacggctgtgacagcccagag
cccgacggcgacgactccatagaccagagccccttgatggaggataaataccgcaaaggc
agcgaggatctggatatcctgttcaagcgatacggttccacagtgcccgctccgaacttc
gccatgcccgtgacggtgccggtgaccaaccagaacacgctgcagttcagcaacccgggc
agctcgctggtgacccagtccctggtgacctcctcgctgacagacccccggctcctgtcg
ccgcagcagccggccctgcagaggaacacggtgtccccagggctgccacagcggccagcc
agtgcaggggcgatgcttgggggagacctgaacaacacgaacggagcctgccccagcccc
gtggggctggccggatccgtgctgggtggacatggcaatgacagcagcagtgacagccca
aggccacccatctttgggggaaatggctacgtcagcgcccgagcctccccgggtctcctt
cccgtgtccaacggcagcagcctgggcaagatcatcccggccaagtcgccgccgccgccc
gcgcacggcgcgcagctggccgccaacagccgcaagccggacctgcgcgtcatcacctcg
cagagcggcaaggggctgatgcaccacctgaccgaggaccacttggctctgcaaaacaca
cagcggctgggtgtctctcaagcaactcactctctgaccacaccagttgtttctgtggct
actccgagtttgctgacacaggggctgcccttctcagccatgcccacagcgtacaacaca
gattatcaactgacgagcgctgagctgtcctcgctgcccgccttcagctcgcctggaggg
ctgtccctgggcaacatctctgcctggcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcaacagcagcagcagcaacagcagcaacaacagcagcagcagcag
ccacagcagccgcagcagcagccgcaacagcagcacctggtcccggtgtcactaggaaac
ttaatacaagggagtcacttgtcccacaccaccactttgactgtcaacaccaatcccaac
atcagcatcaagtccgagcccgtctcgcccaaccgggagaggaacactgccaccccgctc
agcaccttcccccaccagccccgccacgagcccaccggccgctcgcccgtcgacagcctc
agcagcaacaccagctcctacgagggcagcagcgagcgggacgaccccgcccgccccgat
ttcggctcctctctgggcctcctgcgacccaccagcgagcccgagggggagagcccctcc
gtaaagcgcatgcgcttggatacctgggtcacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (14)   
   RefSeq(pep) (14)   
DNA sequence (16)   
   RefSeq(nuc) (16)   
Protein domain (16)   
   Pfam (16)   
All databases (64)   

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