KEGG   Taeniopygia guttata (zebra finch): 100227951
Entry
100227951         CDS       T01082                                 
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100227951 (TBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tgu03000]
    100227951 (TBP)
   03021 Transcription machinery [BR:tgu03021]
    100227951 (TBP)
Transcription factors [BR:tgu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    100227951 (TBP)
Transcription machinery [BR:tgu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100227951 (TBP)
  RNA polymerase III system
    TFIIIB
     100227951 (TBP)
  RNA polymerase I system
    SL1/TIF-1B
     100227951 (TBP)
SSDB
Motif
Pfam: TBP TFIIA
Other DBs
NCBI-GeneID: 100227951
NCBI-ProteinID: XP_030124181
Ensembl: ENSTGUG00000009824
Position
3:complement(70619754..70630012)
AA seq 302 aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSTNSLSILEEQQRQQQ
QQQAAQQSTSQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYSSPMTPMTPITPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq 909 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagtttgccaccctacgctcaaggcttagcctcccctcagggtgca
atgactccaggaattccaattttcagcccgatgatgccgtatggcacaggactgacaccg
cagcctgtccagagcaccaacagtctgtccatattggaggaacagcagcggcagcagcag
cagcagcaagcagcacagcaatccacatcacagcaagcgacacagggaacatctggtcaa
accccccagctcttccattcacagactcttaccacagcccctttaccaggaaccacacct
ctgtactcctctccaatgactccaatgactcccataactcctgcaacacctgcatcagag
agctctggcatagtgccacaactacagaatattgtgtccacagtgaatcttggttgcaaa
cttgatctaaaaactattgcacttcgtgcccgaaatgctgaatataatcccaagcgtttt
gctgctgttattatgagaataagagaaccacgtactactgcactgatattcagctctgga
aaaatggtgtgcacaggagcaaaaagtgaggagcaatccagactggctgcaaggaagtat
gcaagagttgttcagaaactgggttttcctgcaaaatttttggattttaaaattcagaat
atggtgggcagctgtgatgtgaaatttcccatcagactggaaggattggtactcacacac
cagcagttcagcagctacgagccggaattgtttcctggcttgatctacagaatgattaag
ccaagaattgttctgcttatttttgtttctggaaaagtggttttaactggtgctaaagta
cgagcagaaatctatgaagcatttgaaaacatttatcctattttaaagggattcagaaag
acaacgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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