KEGG   Thiomonas arsenitoxydans: THI_1295
Entry
THI_1295          CDS       T02347                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
thi  Thiomonas arsenitoxydans
Pathway
thi03420  Nucleotide excision repair
thi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    THI_1295 (uvrD)
   03430 Mismatch repair
    THI_1295 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thi03400]
    THI_1295 (uvrD)
Enzymes [BR:thi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     THI_1295 (uvrD)
DNA repair and recombination proteins [BR:thi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     THI_1295 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     THI_1295 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_12 AAA_30
Other DBs
NCBI-ProteinID: CAZ87986
UniProt: D6CPQ6
Position
1286141..1288486
AA seq 781 aa
MSALIQQLNPEQRAAVTLPAENALILAGAGSGKTRVLTTRIAWLISTGQVTPAGILAVTF
TNKAAKEMMARLSAQLPIPVRGMWIGTFHGLCNRFLRAHWREAGLPQTFQILDIQDQLAS
IKRLLKALNVDDERHPPKQVQWFINGAKDQGLRPGDVEARDPQSRQLAEIYLAYEAQCTR
DGVADFAELLLRSYEILRDNAAIRSHYRQRFRHILVDEFQDTNRLQYQWLKQLAGPEDAQ
GACVFAVGDDDQSIYAFRGAHAGNMDDYQREFRVRHLIKLERNYRSHGHILDSANTLIAN
NARRLGKNLRTEAGAGEPVRVFEAPSDYAEAQWLIEEIRQLLREGLVHSEIAVLYRANAL
SRVIEGALFNAGLPYRVYGGLRFFERAEVKHALAYLRLLDNPQDDTAFLRVVNFPARGIG
ARTLEQLQDAARLRATPLSEAVDALGGRGAASLQAFLDLVAQMRFQTAAISLPELVRHVL
EASGLNAHYREEREGQERLENLEELVNAAAAFVTQEGFGLQATAQQRQALGAAPDSFAAT
DGIDPATGETLSPLTAFLTHAALEAGDNQAQNGQDAIQMMTVHAAKGLEFDAVFITGLEE
GLFPHENALSETDGVEEERRLMYVAITRARKRLYLSLAQTRMLHGQTRYNLRSRFFDELP
AESLKWLSAKLPGFGGGFGADQHSSWSYTPKVSVPSFTPATSNAGSPSSTGFSPAGVRGA
SSSGARPHGLRIGQAVFHNKFGEGVVLSLEGNGEDTRAQVKFNRHGAKWLALNIAKLTPV
N
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgtctgccctcatccaacaactcaatcccgagcagcgcgccgctgtcaccctgcctgct
gaaaatgctctgatcctcgccggcgccgggagcggcaaaacgcgggtgctcaccacgcgc
attgcctggttgatttccaccgggcaagtcacgcccgcaggcattctggccgtgaccttc
accaacaaggcggcgaaggaaatgatggcgcggttgtcggcgcaactgcccattccagtg
cggggtatgtggatcggcacttttcacggtctgtgcaaccgctttctgcgggcgcactgg
cgcgaggccgggttgccgcagacttttcagattctcgacatccaggatcagctcgccagc
atcaaacggctgctcaaggcgctaaatgtggacgatgaacgccacccgcccaagcaggtg
caatggttcatcaacggcgccaaagatcagggtctgcgtccgggcgatgtggaagcgcgc
gatccgcaaagccgacaactggccgagatctaccttgcctacgaggcccaatgcacgcgc
gacggcgtggccgattttgccgagctgctgctgcgctcctacgagattctgcgcgacaac
gccgccatccgttcgcattaccgccagcgcttccggcacatcctggtggacgagtttcag
gacaccaaccgcctgcaatatcagtggctcaaacagctcgccggaccggaggacgcgcag
ggcgcttgcgtgtttgccgtgggcgacgacgatcagagcatctatgcctttcgcggggcg
catgctggcaatatggacgattaccagcgcgagtttcgtgtccgtcacctcatcaaactg
gagcgcaattaccgctcgcacggccacattctcgacagcgccaacaccctgatcgccaac
aacgcccgccgcctgggcaagaacctgcgcaccgaggccggtgcgggcgagccggtacgc
gtgttcgaggcgccgagcgactatgccgaagcccagtggctgatcgaggaaatccggcaa
ttgctgcgcgaggggctcgtgcatagcgagatcgccgtgctgtatcgcgccaacgcgctg
tcgcgggtcatcgaaggggcgctgttcaatgccgggttgccttaccgcgtgtatggcggt
ctgcggtttttcgagcgagcggaggtcaagcatgcgctggcctacctgcgcctgctcgac
aacccgcaggacgacaccgccttcctgcgcgtagtcaacttccccgcgcgcggcatcggc
gcgcgcactctggagcagttgcaagacgccgcccgtctgcgcgccacgccgctgagcgaa
gccgtggacgccctcggggggcgtggtgcggccagcctgcaggcctttctcgatctagtg
gcgcagatgcgctttcagacagccgcgataagcctgcctgaactggtgcgccatgtgctc
gaagccagcggcctcaacgcccactaccgcgaggaacgagagggtcaggagcggctggaa
aacttggaggaactggtcaacgccgctgccgctttcgtcacccaggaaggctttggccta
caagcgacggcgcagcagcgtcaggcgcttggagccgcgcccgacagcttcgccgccaca
gacggcatcgatcccgccaccggcgaaaccctctcgccgctgaccgcctttctcacacac
gccgcgctcgaagccggcgacaaccaggcgcagaacggacaggacgccattcagatgatg
accgtccacgccgccaagggactggagttcgacgccgtgttcattaccgggctggaagaa
ggcttgttcccgcacgaaaacgcgctgagcgaaaccgatggcgtggaagaagagcgtcgg
ctgatgtatgtggccatcacccgcgcgcgcaagcgcctctacctcagcctagcccagacc
cgcatgctccatggccagacgcgctacaacctgcgcagccggttctttgacgaacttccg
gccgaatcgctcaagtggctcagcgccaaactgccggggttcggcggcggtttcggcgcc
gaccagcacagcagttggagttacaccccgaaagtgtcggtgccgtcgttcacgccagcg
acttccaacgccggatcaccctcaagcactgggttttctccggcaggcgtgaggggggca
agttcgtcaggagcacgcccgcacggcctgcgcatcggtcaggccgtgtttcacaataaa
ttcggtgagggcgtcgtgctcagcttggaaggcaacggcgaagacacccgagcccaggtc
aagttcaaccgtcacggcgccaagtggctcgcgctgaacatcgccaaactcacgccagtg
aattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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