KEGG   Phaeoacremonium minimum: UCRPA7_4646
Entry
UCRPA7_4646       CDS       T03102                                 
Name
(RefSeq) putative atp-dependent dna helicase srs2 protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
tmn  Phaeoacremonium minimum
Pathway
tmn03420  Nucleotide excision repair
tmn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tmn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    UCRPA7_4646
   03430 Mismatch repair
    UCRPA7_4646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmn03400]
    UCRPA7_4646
Enzymes [BR:tmn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UCRPA7_4646
DNA repair and recombination proteins [BR:tmn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UCRPA7_4646
   MMR (mismatch excision repair)
    Other MMR factors
     UCRPA7_4646
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 Viral_helicase1 ADDB_N AAA_11
Other DBs
NCBI-GeneID: 19325117
NCBI-ProteinID: XP_007915388
UniProt: R8BKF0
Position
Unknown
AA seq 604 aa
MSTGLYDNPILKTLNKAQCRAVCSNAATVAILAGPGSGKTHTLTSRVVWLVDTVGYLPEN
VIVATFTVKAAREMKERIGKALGHDRANKLILGTFHSISRRYLAAYGKKIGLNQKFGIAD
DSDSRAIIGRICKRLQLAVDPVIARGWISKKKAKGLEGDKPTKRQGSNQGPSSKDLETCY
QEYQSHLEKSNLLDYDDLLVRCVDLLQQFPSCVSNVQTVLIDEYQDTNGVQYDLMKLFAQ
KQKSITVVGDPDQSIYGWRSAEIRNLYRLLHDYPGTEEVSLEENYRSSQSILDTSLQVIQ
QDTKRYQKVLLPVHNRGTRPVLRKLRSSSAEGEWIASEVRRLSSMSGKMLGYDDVAILLR
SAALSRHIESALGKAGIAYKMVGGFKFYERAEIKIILEYLRVIHQPENNDALARIINVPK
RGVGDVTIKALLEEAERSKLSMWNLLIKHCRGDRSAKTNITKQAEQKISGELIRLIMGTR
KRLENQEDGKPFGLVEMIEHLLTQLKFQKFLEDSHSEDHEQRWANVQEFLALASDFMKEL
EQGPDEALPEIDGLEQVKETDALARFLANVSLASDAQTNNQDQEAKPMIEVKTSEVARTL
SWNE
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgtcgaccgggctatatgacaaccccatcttgaagacgctcaataaggcgcaatgcaga
gctgtgtgctccaacgccgccaccgttgccatcctggctggtccgggaagcggcaagact
catacgctgacatcccgcgtggtatggcttgttgacacggtgggatacctgcctgagaat
gtcatcgttgcgacttttacagtgaaagccgcccgtgagatgaaagagcgtatcgggaag
gctcttggacatgaccgggcaaacaagctcatcctgggcactttccacagcatctctcgc
cgctacctggctgcatacggcaagaagattggcctgaaccaaaaattcggcattgcagat
gactcggactcgcgagcaatcataggacgtatctgcaaacgtctacagctagctgtggac
ccggtaattgcccgtggatggatcagtaagaagaaggcaaagggactagagggagacaag
cctaccaaacgacagggaagcaatcaggggccgagctccaaggaccttgagacatgctac
caggaatatcaaagccacctcgaaaagtcaaatcttctcgactacgatgacttgttggtt
cgctgtgtcgacttactccagcagtttccgtcgtgcgtttccaacgtgcaaacagtcctt
atcgacgaataccaggataccaatggagtccagtatgatctgatgaagctctttgcccag
aagcagaagagtatcaccgttgttggtgaccctgatcagagcatttacggttggcgatcg
gcagaaattagaaatctctatcgattacttcacgattatcccggcacagaagaagtctcc
ctggaggagaattatcggtcatcgcaatctatattagacacatcactccaagtaattcag
caagatacgaagcgatatcagaaggtattactaccggtgcacaacagaggcacccgccca
gtccttcgaaaattgaggagctcctctgcggagggtgaatggatcgcgtcagaggtcaga
agactctcctccatgtctgggaagatgttgggatacgatgatgtcgccatactgctgcgt
tccgccgcactttcgcgacatattgaaagcgccctcggaaaggcaggcatcgcatacaaa
atggttggtgggttcaagttctacgaacgagcggagatcaaaatcattctcgaatatctg
agagtgatccatcaacccgaaaacaacgatgctctagccagaattatcaacgtgcccaaa
cgaggcgttggagatgttacgatcaaggcgttattggaggaggcggaaagatcgaaactc
agcatgtggaacctcctgatcaaacactgtcgaggagaccgctctgcaaagacaaacata
acgaagcaggccgaacagaaaataagtggcgagctgatacgccttatcatgggaacaagg
aagcgcttggagaatcaagaagatggcaagccgttcggccttgtggagatgatagagcat
cttcttacccagctaaagtttcagaaattcctcgaagactcgcattccgaggatcacgaa
cagaggtgggcaaacgtgcaagagttcttggctcttgcatcggacttcatgaaggaactg
gaacaggggcccgatgaagctttgcccgaaattgacggcttagaacaggtcaaagaaacg
gatgcacttgctcgatttctcgccaatgtttcgctggcctcggatgcccaaaccaacaat
caagaccaggaggccaagccgatgatcgaggtcaaaacgtccgaggttgcacgtaccctc
agctggaacgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system