KEGG   Tremella mesenterica: TREMEDRAFT_45592
Entry
TREMEDRAFT_45592  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
tms  Tremella mesenterica
Pathway
tms03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TREMEDRAFT_45592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tms03009]
    TREMEDRAFT_45592
Ribosome biogenesis [BR:tms03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TREMEDRAFT_45592
SSDB
Motif
Pfam: Utp21 WD40 ANAPC4_WD40 eIF2A Utp12 NBCH_WD40 WD40_2
Other DBs
NCBI-GeneID: 18493769
NCBI-ProteinID: XP_007007297
JGI: Treme1_45592
UniProt: R7SCX0
Position
Unknown
AA seq 934 aa
MTHRPEKRTRKGKATGHAGPSQPPPSSRLFAPFRALGHVSNHVPFSMFVHSSRGALAKPS
VNIVTSIGRSWMMWEAGRMGLLFVGPDSGEQITSLAQTGTDVYAACGNGVTRYLRGKAVG
RYESGGDKVGKILIFGEQLVGLTEDGGGLLIWDIQSKELVNKIQFPPTFKATVLLHPATY
LNKILIGDSQGQLALYNTRTCSLIHNFTPTSSPITALVQSPAIDVVGVGHLDGTVDIYDI
REGESIMQMKMDDGGISALSFRMDGVPVLAAGSTSGSVALWDLSKEGRILHVLRGAHEQS
VGALEWVPGQPLFITSSGDNTVKQWLCDSPDSPPRLLKHRGGHHSPPTLIRYYGTDGKQI
LTSGRDRSLRYTSVVRDSRSHELSQGQSFHKRSKALGMSVSELKLAPITALSSCSIRSKD
WDDVLTAHQDEPGARTWKVLDKKMGGHLLEVDDGVVQAVCVSACGNFGIIGSSTGEIKMW
NMQSGKHRRTYHLNGLLGTGTSKVTKKSKGETLRQQGAAITGLATDALNTVVVASTIEGK
IYFFDFHTTKLLHRLALPSPITALDLQRDSGLLSATCDDLIVRLVDVETRRVVRELRGFK
GRILDTTFSPDSRWLIAASLDSAIRTFDIPTGRLIDAFQVPSIPTSLTFSPTGDFLATSH
VDSLGVHLWANRAQFTDVPLKAIDEEAELIQSNLPSVRDDTSSGLEDLVGFSGEVGLPEF
VDSYETPEQLEDGLVTLSLMPRSRWQTLLNLDTIRERNKPKVPPKAPEKAPFFLPTVSGL
ETRFDLSTQIEGEKVERIGGLGGFSGHGGLGGLLESEFTKRLEADGGDYTSFFTYLKSLS
PSNADLEIRSLSSLSHLSILLTALTARLASKKDYEAVHAFTAVFLQIHGDVLVGNSELLE
GLVKLREAQREAGKRIGEMLGYAQGTLTFLRGGI
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgacacatcgtcccgaaaaacgtactcgaaaaggcaaagcaaccggtcatgctggaccc
tcacaaccccctccctcttctagactctttgcccctttccgtgcccttggccatgtatcc
aatcatgttcccttctccatgttcgttcattcatctaggggagcgttggcgaaaccaagt
gtgaacatcgtcacttccattggacggagctggatgatgtgggaagctggacgtatgggt
ttgttgttcgtcggaccagattcaggggaacagatcaccagtttggcgcagacgggaacg
gacgtgtatgctgcgtgtggtaatggagtgaccaggtatttgagagggaaggcggttggg
aggtatgaaagtggaggcgataaagtgggaaagattttgatatttggtgaacagcttgtg
ggactgactgaggatggaggggggttgttgatttgggatattcaaagtaaagagctggtc
aacaaaatccaatttcctccgacattcaaagctacagtactacttcatcccgcaacatac
ctcaacaaaatcttgataggtgactctcaaggtcaattagcactctataacacccgaaca
tgctcactgatacacaactttactccaacatcatcccccatcacagctttagtccaatcg
ccggcaatcgatgttgtcggtgtaggccacttggacggcacggtagacatatatgacata
cgtgaaggagagtccataatgcaaatgaaaatggacgatggtgggatttctgctttgtct
ttccgtatggatggtgtgcccgttctggctgctggttctacctcaggttctgtcgctttg
tgggatttgagcaaagaaggtaggatattacatgtcctccgaggtgcgcatgagcagagc
gtcggagccttggaatgggtcccaggacaacctctgttcattacgtctagtggagacaat
actgtcaaacaatggctgtgcgattctccagactcccctcctcggcttctcaaacatcgt
ggcggacatcattcccctcccactttgatccgatattacggtactgacggcaaacaaatc
ctcacttccggtcgagatcgttcattgagatatacaagcgtagtccgtgattctcgcagt
cacgaactatctcaaggtcaatccttccataaacgttccaaagcattgggaatgtccgtt
tcagagctcaaattggctccgataactgcgttgtcgagttgttccataagatcaaaagac
tgggacgatgtattgactgcacatcaggatgagccaggggcaaggacatggaaagttttg
gataagaagatgggaggacatttgttagaggtagatgatggtgttgtacaggcggtatgt
gtctccgcatgtggaaactttggtatcatcggttcttcaactggggaaatcaaaatgtgg
aatatgcaatctggcaagcatcgtcggacgtaccatttgaatggacttttaggcactggg
acttcgaaagtcacaaaaaagtcaaaaggggagacgttgaggcaacaaggagcggctata
acgggtctggcgacggatgcactcaatactgttgtcgtggctagtacaatcgaggggaag
atctacttcttcgatttccacactactaaactcttacatcgactcgcacttccttcacct
atcaccgcacttgatttacaacgcgacagtggacttttatctgctacatgtgacgatctg
atagtgaggttggtagatgttgagactagacgagttgtgcgtgagttgaggggtttcaag
ggtagaatattggacactacattctcccccgactctcgatggctcatcgcagcatccctc
gattctgccatccgaacattcgacatacccaccggtcgtttaatcgatgcttttcaagtt
ccctccatccctacttctcttactttttctccaaccggcgatttcctcgccacctcacat
gtcgattcactaggagtacatctttgggctaatcgtgctcaattcactgatgtacctctc
aaggcgattgacgaggaagccgagttgatacagagtaatttaccttctgtaagggatgat
acttcttcaggtctggaagatttggtaggtttctcaggagaagtggggttgcctgaattt
gtggatagttacgaaactcccgaacagttggaagatgggttggtgactttgtctttgatg
ccgagatcgaggtggcagactttgttaaatttagatactatcagggaacgtaataaaccc
aaagtgccacctaaagctcctgaaaaagcaccgttcttcttacccactgtgtcaggtttg
gaaacgcggttcgacctatcaactcagatagaaggggagaaggttgaacgtataggtgga
ctgggcggtttcagtggacacggtggtttaggaggactgttggaatcggagtttactaag
aggttggaggctgatgggggagattatacttcattcttcacgtacctcaaatccctttca
ccatctaatgcagatctggaaatccgatcattatcttccctttcccatctctccatcctc
ctcaccgctctgacggctcgtttggcctctaagaaagattacgaagcagtgcatgctttc
acagcggtgttcttacaaatacatggggatgtgttggtgggtaactcagaattattagaa
ggattggtaaaattacgtgaggctcagagagaagcggggaagagaattggggaaatgttg
ggttatgctcaaggtactttaacgtttttgagaggagggatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system