KEGG   Trichechus manatus latirostris (Florida manatee): 101360500
Entry
101360500         CDS       T05135                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101360500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101360500
Enzymes [BR:tmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     101360500
Messenger RNA biogenesis [BR:tmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     101360500
SSDB
Motif
Pfam: OB_NTP_bind DEAD Helicase_C HA2_C HA2_N AAA_22 AAA_19 nSTAND3 AAA_14 PhoH ATPase AAA_23 DUF6782
Other DBs
NCBI-GeneID: 101360500
NCBI-ProteinID: XP_004379234
UniProt: A0A2Y9DQP4
Position
Unknown
AA seq 1005 aa
MSYDYHQSWSRDGCPRNSGGGFGGSRGGGYGGSRGFGGGGGGGRGGRGRHPGHLKGRQIG
LWYARLQEQKNKEAERQERAVVHMDEHREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHG
YGTEVPAENRPSTEKKLEGQEKKLINQEKRTFRSRDKSYTDRDSEYLLQENEPDVTLDQQ
LLEDLQRKKTDPRYIEMQHFREKLPSYGMQKELVNLIANHQVTVISGETGCGKTTQVTQF
ILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAEACGGGNSTGYQIRLQSRLPRK
QGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVFMTIIKDLLTSRPDLKVV
LMSATLNAEKFSEYFGDCPIIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEYRSPFKRGFM
QGHVNRQEKEAKEAIYEERWAGYVRELRRRYSARTVNVLQMMDDDKVDLNLIAALIRYIV
LEEEDGAILVFLPGWDNISSLHDLLMSQVMFQSDKFLIIPLHSLMPTVNQTQVFKKTPPG
VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRA
GRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLGRLMDPPS
SEAVWLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAA
SLSFKDPFVIPLGKEKIADARRKELAKDSRSDHLTVVNAFKGWEEARQRGFRYEKDYCWE
YFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRDPQDPESNVNSDNEKIIKAVICAGLYPKV
AKIRPNLGKKRKMVKVYTKSDGLVSIHPKSVNVEQTDFRYNWLIYHLKMRTSSIYLYDCT
EVSPYCLLFFGGDISIQKDDDQETIAVDEWIIFQSPARIAHLVKELRRELDVLLQEKIES
PCPVDWKDTACRDCAVLSAIIDLIKTQEKAMPRKFPPRCRDECFS
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgagctatgactaccatcagagctggagccgcgatggctgtccccgcaactccggcggg
ggctttggagggagtcgtggagggggctacggagggagccgaggttttggcggcggcgga
gggggtggtcgaggcggccggggccggcatcccgggcacctgaaaggccgccagatcggc
ttgtggtacgcgaggttgcaggagcagaagaacaaggaggcagagaggcaggagagagct
gtagtacacatggatgaacatcgagaagaacaaattgtgcagctgctgaattctgtccaa
gctaagaatgataaagattcagaagcacagatatcctggtttgctcctgaggatcatgga
tatggtactgaagtccctgctgagaacagaccaagcacagagaagaaacttgagggccag
gaaaagaaattgataaaccaagaaaaaaggacctttagaagcagagacaaatcatacaca
gaccgagattctgagtacctcctgcaagaaaatgagccagatgtaaccttagaccaacaa
ctactggaagatttacaacggaagaaaactgaccctcggtatattgaaatgcagcatttc
cgggaaaagctgccttcatatggaatgcaaaaggagttggtgaatctgattgctaatcac
caggtgacagtaataagcggtgaaactggttgtggaaaaaccactcaggtcactcagttc
attttggatgattatatcgaacgaggaaaaggatctgcgtgcaggatcgtgtgtactcag
ccaagaaggatcagtgccatctcagttgcagagcgagtggctgcagaaagggcagaggct
tgtggcggcggtaacagtactggataccagattcgtctccagagtcggctgccaaggaag
cagggctctatcttatactgtacaacagggatcatccttcagtggctgcagtcagacccg
catttatccagtgtcagtcacatcgtcctggatgaaatccacgagagaaatctacagtca
gatgtcttcatgacgattattaaagatcttctcacgtctcgacctgacctgaaggtggta
ctgatgagtgccacactgaatgctgagaaattttcagaatattttggtgactgtccaatc
atacatatacctggttttacttttccggttgtggagtatcttttggaagatataattgaa
aagataagatatgttccagaacaaaaagaatacagatccccgtttaagaggggtttcatg
caagggcacgtaaatagacaggaaaaagaagccaaagaagccatctatgaagaacgctgg
gcaggttacgtaagggaactgcgaagaaggtattctgcaaggactgtaaatgttttacaa
atgatggatgatgataaagttgatctgaacttgattgctgcccttatccgatacattgtt
ttggaagaagaggatggtgcaatactggtgtttctgccaggctgggacaatatcagcagt
ttacacgatctcttgatgtcacaagtgatgtttcagtcagataagtttcttattatacct
ttacattcgctgatgcctacagttaaccagacacaggtgtttaagaaaacccctcctggt
gttcggaaaatagtgattgctaccaacattgcggagactagcattaccatagatgacgta
gtttatgtgatagatggagggaaaataaaagagacgcactttgacactcagaacaacatc
agcaccatgtcggctgagtgggtcagtaaagccaacgccaaacagaggaagggccgggct
ggcagagttcaacctggtcattgctatcatctctacaatggtctcagagcaagcctacta
gatgactatcaactgccagaaattttgagaactcctttggaagaattatgtttacaaata
aagattttaaagctaggtggaattgcttattttctggggagattaatggatccaccatca
agtgaggcagtgtggctctccataaaacacctgatggaactgaatgctttggataaacaa
gaagagttgacacctcttggagtccacttagcacgattaccggttgagccacatattggc
aaaatgattctctttggagctctgttctgttgcttagacccagtactcactattgctgct
agtctcagcttcaaagatccctttgtcattccgttgggaaaggaaaagatcgcagatgca
agaagaaaagaattggcaaaggattctagaagtgaccacctgacagtcgtgaatgcattt
aagggctgggaagaagctaggcaacgtggtttcagatatgaaaaggactattgctgggaa
tattttctgtcttcaaacaccctgcagatgctgcacaacatgaaggggcagtttgccgag
cacctccttggagcgggatttgtaagcagtagggatcctcaggacccagagtctaacgta
aattcagataatgagaagataattaaagctgttatctgtgctggtttataccccaaagtt
gctaaaatccgaccaaatttgggtaaaaaaagaaaaatggttaaagtgtatacaaaaagt
gatggattagtttccattcatcctaaatctgttaatgtggaacagacagactttcgctac
aactggcttatctatcatctgaagatgagaacaagcagcatatacttgtatgactgcaca
gaggtttccccgtattgtctgttgttctttggaggtgatatttccatccagaaggatgat
gatcaagaaactattgctgtagatgaatggattatctttcagtctccagcaagaattgcc
catcttgttaaggaattaagaagggaactggatgtccttctgcaagagaagatcgaaagt
ccgtgtcctgtagactggaaggacactgcgtgcagagactgtgcagtgctatctgccatc
atagacttgatcaaaacgcaggaaaaggcaatgcccaggaagtttccaccacgctgccgg
gatgagtgtttcagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system