KEGG   Trichechus manatus latirostris (Florida manatee): 101362026
Entry
101362026         CDS       T05135                                 
Name
(RefSeq) nuclear pore complex protein Nup88
  KO
K14318  nuclear pore complex protein Nup88
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013  Nucleocytoplasmic transport
tmu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101362026
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101362026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101362026
Messenger RNA biogenesis [BR:tmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101362026
SSDB
Motif
Pfam: Nup88 DUF659
Other DBs
NCBI-GeneID: 101362026
NCBI-ProteinID: XP_012410917
UniProt: A0A2Y9FWP3
Position
Unknown
AA seq 580 aa
MVLELPKRWGKNSEFEGGKSTVNCSTTPIAERFFTSSTCLTLKHAAWYPSEMLDPHIVLL
TSDDVIRRAYTASLGETAVAFDFGPLAAVSKNIFGQKGKEEVVAYPLYILYENGETFLTY
VSLFHSPGNIGKLLGPLPMHPAAEDNYGYDACAILCLPCIPNILVIATESGMLYHCVVLE
GEEEDDQTSEKSWDSRADLIPSLYVFECVELELALKLASGEDEPFDSDFSCPIKLHKDPK
CPSRYHCTHEAGVHSVGLTWIHKLHKFLGSDEEDKDSLQELATEQKCFVEHILCTKPLPC
RQPAPIRGFWIVPDILGPTMICITSTYECLIRPLLSTVHPASPSLLCTREDVEVAESPLR
ILAETPDSFEKHIRSILQRSVANPAFLKSSERDTAPPEECLQLISRATQVFREQYILKQD
LAKEEIQRRVKLLCDQKKKQLEDLNYCREERKSLREMAERLADKYEEAKERQEDIMNRMK
KVLHSFHSQLPVLSDSERDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQK
PTITLSAYQRKCIQSILKEEGEHIREMVKQINDIRNHVNF
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggtattagaattacctaaaaggtgggggaagaattctgaatttgaaggtggaaaatca
acagtgaattgtagtaccactccaattgctgagagatttttcaccagttctacgtgtctg
actctaaagcatgctgcctggtatccaagtgaaatgctggatccccacatagtgctgtta
acatcagacgatgtaataagaagggcatataccgcatctttaggagagacagcagttgca
tttgactttgggccattggcagcagtttcgaagaatatatttggacaaaaaggcaaagag
gaagtagtggcatacccattgtacatcttatatgagaatggggagactttccttacgtat
gttagtctgtttcacagccccgggaatattggaaagctgttaggtccgttgcccatgcat
cctgcagctgaagataactatggttatgatgcttgcgctatactctgcttaccctgcatc
cccaacatcttagtgatagctactgaatcaggaatgctgtatcactgtgttgtgctagaa
ggggaagaagaagatgaccaaacttcagaaaagtcctgggattccagggctgacctcatt
ccttctctgtatgtgtttgaatgtgttgagttggagcttgctctgaaactggcatctgga
gaggatgagccctttgattctgacttttcttgtccaatcaaacttcacaaagatcccaaa
tgtccctcaagatatcactgtactcatgaagctggtgtacatagtgttgggctaacttgg
attcataaacttcacaaatttcttggatcagatgaagaagataaggatagtttacaggaa
cttgctacagaacagaaatgctttgtagaacacatcctgtgtacaaagccattgccatgc
aggcagccggctccgataagaggattctggatcgtccctgacattctggggcccacgatg
atctgcatcaccagtacctatgaatgcctcataagacctttattaagcacagtccatcca
gcatctccttccctgctttgtacccgagaagatgttgaagtggcagagtctcccctccgt
attctggctgaaaccccggattcatttgaaaagcacattagaagcattttgcaacgtagt
gttgccaatccagcatttctgaagtcgtctgaaagggatacggcccctcctgaagaatgt
cttcagcttattagcagagccacacaggtgttcagagaacagtacatccttaaacaggac
ttggcaaaggaggagattcagcggagggtcaaattgttgtgtgaccaaaaaaagaaacaa
ctagaagatctcaattattgtcgagaggagagaaaaagtctacgggaaatggctgagcgc
ttagctgacaaatatgaggaagctaaggagagacaagaagatatcatgaacaggatgaaa
aaagtactgcacagttttcactctcagctcccggttctctctgatagtgagagggacatg
aagaaagaattacagctgattcctgatcaacttcgacatttgggcaatgccatcaaacag
gttactatgaaaaaagactatcaacagcggaagatggaaaaggtactgagtcctcaaaaa
cccaccattactctcagtgcctaccagcgaaagtgcattcagtccatcctgaaggaggag
ggtgaacacataagggaaatggtgaagcagatcaatgatatccgaaatcacgtaaacttc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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