KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026986G001
Entry
GSTEN00026986G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K06236  collagen type I alpha
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510  Focal adhesion
tng04512  ECM-receptor interaction
tng04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tng00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    GSTEN00026986G001
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    GSTEN00026986G001
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    GSTEN00026986G001
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tng00536]
    GSTEN00026986G001
Glycosaminoglycan binding proteins [BR:tng00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   GSTEN00026986G001
SSDB
Motif
Pfam: Collagen COLFI VWC TILa
Other DBs
NCBI-ProteinID: CAG06575
UniProt: Q4RYF7
Position
2
AA seq 1545 aa
GCTLDGQSYNDKDVWKPEPCQICICDSGSVMCDEVICEDTTDCADPMIPEGECCPICPDA
EGTQGPIDEQPTSGEKGPMGSRGPPGPSGSSGPQGFTGPPGEPGEPGSPGPMGPRGPAGP
HGKNGDDGEPGKSGRPGERGLPGTSGARGIPGTAGLPGIKGHRGFNGLDGAKGDSGPAGP
KGEPGTNGENGVPGAMGARGLPGERGRPGAPGPAGAPGNDGNSGPSGPPGPTGPAGPPGF
PGAAGAKGETGPQGARGSDGPAGARGEPGNPGPAGAAGVAVSSGHFRFYTSLCTLSPVKT
ELVFNFVVHFFEQGAPGSDGSPGAKGAPGAAGIAGSPGFPGSRGPAGAQGAVGAPGPKGN
NGDPGPPGSKGEPGVKGEPGPVGVQGLPGPSGEEGKRGPRGEPGGVGPRGPHGERGAPGA
RGFPGGDGAAGGKVSKACIYARVENQLSLGGIFIKFFLTLSLDRVPLVSVVPLAQWDLRE
PPVSLEALVLPVHLDPRWVLQHTSFQEQPSCVSNDVYIGFVFLPKGVTGSPGSPGPDGKV
GPAGIPGQDGRPGPAGPGGPRGQPGVMGFPGPKGVSGESGKTGERGVPGAAGAVVSINFY
TARQHKLNFLCNGLLFRFKLHQTVVERIAFVPRVLLVRMEILVLLDLLVLLDSLDPKVLL
GETGKPGEQGVAGEVGPPGPSGPRGDRGFPGERGATGVNGPPGSRGSPGPSGNDGAKGEP
GAAGAPGGIGAPGMQGMPGERGASGLPGAKGERGEAGVKGGEGAPGKDGGRGMTGPMGAP
GPSGAQGERGEPGPVGIAGPTGPRGSNGERGEAGPAGPAGFAGPPGADGQPGAKGETGDT
GPKGDAGPAGPTGPVGAAGPQGPAGPTGPKGATGGVGAPGATGFPGPTGRVGPPGPAVVA
GPPGPAGPVGKDGARGARGETGPAGRPGEAGPVGPGGPPGEKGSPGSDGAAGPAGIPGPQ
GIAGQRGTVGIPGQRGERGSPGTAGPAGEPGKAGTWVDLLVSGGPPWTCWTPWTSVVPLE
SLGREGSNGHDGAPGRDGAPGAQGKTLVLHQSLCCCLPFWLLLLDQKANLALKLWILKLS
GIFSFRETVVRVVLLDLLDLLVLPEPLELLAPLERLVTVARPVLLVLLAPLVLLVSVVLL
YVLVPINVILTQYFRLILAELLLLPPRVLLELRETEERLVRLETEATKDTEDSPAWLVCP
DLLVPMEREDLLVPLDLLDLEYGPAGSSGSPGKDGMNGLPGPIGPPGPRGRNGEMGPSGP
PGPPGPPGPPGAPGGGFDFISQPIQEKAPDPLRGGYYRADDPNMVHNRDMEVDTTLKTLT
QKVEKIRSPDGTQKSPARMCRDLRMCHPEWKSGMYWVDPNRGSPLDAIKVHCNMETGETC
IYPTDSSIPMKNWYLSKNIKEKKHVWFSESMTGGFQFQYGMDGADSEDVNIQMTFMRLMS
NQASQNITYHCKNSIAYMDSATGNLKKALLLQGSNDVEIRAEGNSRFTYSVSEDGCTSHT
GSWGKTVIDYKTSKTSRLPIIDIAPMDVGAPDQEFGVEVGPVCFL
NT seq 4638 nt   +upstreamnt  +downstreamnt
ggctgcacattagatggacagtcgtacaatgacaaggatgtatggaaacccgagccctgc
cagatctgcatctgcgacagtggatccgtcatgtgcgatgaggtgatctgtgaggacacg
actgattgcgccgaccccatgatcccagagggagagtgctgccctatctgtccagatgct
gagggtacccagggtccaatagatgagcagccaaccagtggagagaagggtcccatgggt
tcccgtggtcctcctggaccttctggttcctctggccctcagggtttcactggcccccct
ggagagcccggtgagccaggatctcctggtcccatgggtccccggggtcctgctggcccc
catggaaagaacggagatgatggtgagcctggcaagtctggtcgcccaggtgagcgtgga
cttcctggtacctcgggagctcgcggaatccccggaaccgctggactccctggcatcaag
ggacacagaggattcaacggcctggatggagctaagggagacagtggaccagctggcccc
aagggagagcctggtaccaatggtgagaacggcgtccctggagctatgggtgctcgtggt
cttcctggtgagagaggccgccctggagctcctggccctgctggtgctcctggtaacgac
ggcaactctggcccttctggaccccctggacctactggacctgctggtccccctggattc
cccggtgctgctggtgctaagggagagactggccctcagggagcccgtggtagtgatgga
cctgcaggagcccgcggtgagcctggtaacccaggacccgctggagctgctggagttgct
gtgagtagtgggcatttccggttttacacatcactttgcacgctttcccctgtgaagaca
gagttggttttcaactttgttgttcatttctttgaacagggtgctcctggatctgatggt
tctcctggtgctaagggagctcctggtgctgctggtattgctggttcccctggtttccct
ggcagccgtggtcctgctggagctcagggtgctgtcggtgctcctggtcccaagggtaac
aatggtgacccaggtcccccaggttccaagggagagcctggtgtcaagggagagcctggc
cctgtaggagttcaaggacttcctggaccttctggtgaggaaggaaagagaggaccccgt
ggagagcctggtggtgttggaccccgtgggcctcatggagagcgtggtgcccctggtgct
cgtggtttccctggtggtgatggagccgctggtggcaaggtcagtaaagcatgtatctat
gcaagagtagaaaaccagttgtctctcggtggtatttttatcaaatttttcttgacactc
tcccttgacagggtgcccctggtgagcgtggtgcccctggcccagtgggacctcagggag
ccaccggtgagtctggaagccctggtgctcccggtgcacctggatccaaggtgggttctg
caacatacttcttttcaagagcaaccttcctgtgtcagcaatgacgtgtatattggcttt
gtctttcttcctaagggtgtgactggtagcccaggaagtcctggccccgatggaaaagtt
ggacccgctggtattcctggacaagatggacgccctggacctgctggacctggtggacct
agaggacagcctggagtcatgggattccctggacctaagggagtttctggcgagtctggt
aagactggtgagagaggtgtacctggtgctgctggtgctgttgtgagtattaatttttat
acagccaggcagcacaaactcaattttctgtgtaatgggcttttatttagatttaaactg
caccaaactgttgttgagcggattgcttttgttcctagggtgctcctggtaaggatggag
atactggtgctcctggacctgctggtcctgctggactccctggaccccaaggtattactt
ggagagactggcaagcctggagagcagggtgttgctggtgaggttggaccccctggacca
tctggaccaagaggagatagaggtttccctggtgagcgtggtgctactggcgttaatggc
ccacctggatctcgtggctctcctggtccctctggcaatgacggagctaagggagagcct
ggtgctgccggtgcccctggtggtattggagcccccggtatgcagggaatgcctggtgag
cgtggagcttctggtctccccggtgcaaagggagagagaggagaggctggtgttaaggga
ggagaaggtgcccctggcaaagatggcggccgtggtatgactggtcctatgggagcccct
ggaccctctggtgctcagggtgagaggggtgagcctggccctgtcggaattgctggaccc
actggtcctcgtggttccaatggtgagcgtggagaggctggacctgctggacctgctggt
tttgctggacctcctggtgctgatggtcagcctggtgccaagggagagaccggtgacact
ggacccaagggagatgctggtcccgctggacccactggacctgttggtgctgctggtcct
cagggccctgctggtcctactggacccaaaggtgctactggtggtgttggagctcctggt
gcaactggtttccccggacctactggcagagttggaccccctggcccagctgtagttgct
ggaccccctggtcccgctggacccgtcggcaaagatggcgcaagaggagctcgtggtgag
actggtcctgctggccgccctggtgaggctggaccagttggtcctggaggacctcctggc
gagaagggatctcctggttctgatggtgccgctggccccgctggtatccctggaccccaa
ggtattgctggacagcgcggtaccgtaggtatcccaggtcagcgtggagagcgtggatcg
ccgggtacagctggaccagctggtgagcctggaaaagcagggacctgggtggacctgttg
gtgagcggtggacccccctggacctgctggaccccctggacttcagtggtgcccctggag
agcctgggtcgggagggatcaaacggtcatgatggtgcccctggccgtgacggagctcct
ggcgcccaaggtaaaactttggttttgcaccagagtctttgctgttgcttgcctttctgg
ctccttttattagaccagaaagcaaaccttgccttaaaactgtggattctcaaactcagt
ggaattttctcctttagggagaccgtggtgagagtggtgttgctggacctcctggacctc
ctggtgctcccggagcccctggagctgttggcccctctggaaagactggtgaccgtggcg
aggccggtcctgctggtcctgctggcccctctggtcctgctggtgtccgtggtcctgctg
tatgtattagtcccaataaatgtcattttgacacaatactttagactaattttggctgaa
ctactgttacttccacccagggtcctgctggagctaagggagacagaggagaggctggtg
aggctggagacagaggccacaaaggacacagaggattctccggcatggctggtctgcccg
gacctgctggttcccatggagagagaggacctgctggtgcctctggacctgctggaccta
gagtacggacctgctggcagcagtggctctcctggtaaggatggcatgaacggtctgccc
ggacccattggaccccctggacctcgtggtcgcaatggagagatgggtccttctggtcct
cctggacctcccggaccccctggaccccctggagctcccggtggcggatttgacttcatc
agccagcctattcaggagaaggctcccgatcccctccgtggaggctactaccgtgctgac
gaccccaacatggtgcacaaccgtgacatggaggttgacactaccctcaagaccctgact
cagaaggttgagaaaatccgcagccctgacggtacccagaagagccctgctcgcatgtgc
cgcgatctgaggatgtgccaccctgagtggaagagcggaatgtactgggttgaccccaac
cggggatctcctctggatgccatcaaggtccactgcaacatggagactggcgagacttgc
atctacccaactgactctagcatccccatgaagaactggtacctcagcaagaacatcaag
gagaagaagcacgtctggttcagcgagtccatgaccggtggattccagttccagtatggc
atggatggagctgattccgaggatgtcaacatccagatgaccttcatgcgcctgatgtcc
aaccaggcctctcagaacatcacataccactgcaagaacagcattgcctacatggactcc
gccaccggaaacctgaagaaggctctgctgctccagggatccaacgacgtcgagatcaga
gccgagggcaacagccgcttcacatacagtgtcagcgaggacggctgcacgtcacacact
ggctcatggggcaagacagtcatcgactacaagacatctaaaacatcccgcctgcccatc
attgacattgctcctatggatgttggtgcacccgatcaggagtttggtgttgaagttggc
cctgtctgcttcttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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