KEGG   Thermococcus peptonophilus: A0127_02730
Entry
A0127_02730       CDS       T04728                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
tpep  Thermococcus peptonophilus
Pathway
tpep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A0127_02730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpep03019]
    A0127_02730
   03009 Ribosome biogenesis [BR:tpep03009]
    A0127_02730
Enzymes [BR:tpep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A0127_02730
Messenger RNA biogenesis [BR:tpep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A0127_02730
Ribosome biogenesis [BR:tpep03009]
 Prokaryotic type
  rRNA helicases
   A0127_02730
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AMQ18158
UniProt: A0A142CTQ6
Position
complement(523659..524879)
AA seq 406 aa
MSFRELGLSSASVEAVERKGFSTPTDIQREVIPLLLSAESDIVGQSKTGSGKTAAFGLPI
LDSIDEPIKDVQALILTPTRELAIQVTDELRSLRGKRRIYVYSVYGGQPIGPQIRALERG
VHIVVGTPGRVLDHIRRGTLNLDGVRFFVLDEADRMLDMGFQEDIEAIFRATPSDRRVLM
FSATMPMDVLLLAKKYMKNPEVVIVSRDELVPGEVEQEYIEAVPHRRFDLLTKILSDESD
EFYGIVFCQTKAETRELSSRLRMAGFRAEALNGDMSQPAREKTFNRFKDRKTKILVATDV
AARGLDVPEITHVINYSIPMNPEQYIHRIGRTGRMGKKGKAITFIAPGELKRFRYITKQA
GVEVRKSEFSEGIPREYRERLSQEELEGEYRGRWGSMKPRQRRRRY
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgagttttagggaacttggattatccagtgcttcagttgaagcagttgaaagaaagggt
ttttcaaccccgaccgacattcagagggaggtaataccccttctgctctctgccgagagc
gacatcgtgggccagtcaaaaacaggaagcgggaaaacagccgcttttggacttccgatt
ctggattcaatagatgaacccataaaggacgttcaggcactgattctaacccccacaagg
gagcttgccatacaggtcactgacgaactcaggtcgcttaggggcaaaaggagaatttac
gtttactccgtttatggcggacagccgatcggacctcaaataagggcactcgaaaggggt
gtccacatcgtcgttggcaccccgggcagggttctcgaccatatacggcgcggcacgctg
aacctcgatggagtcaggttcttcgtccttgatgaagctgacaggatgcttgacatgggc
ttccaggaggacattgaggccattttcagggcaacacccagtgacaggagagttctgatg
ttctcagccacaatgcccatggacgttcttctgctggcaaagaagtacatgaaaaatcca
gaggtagttattgtcagcagggacgagcttgtcccaggagaagtagagcaggagtacatc
gaagctgttccccacagaaggttcgaccttcttaccaagatactctcagatgagtctgat
gagttttacggcatagtgttctgccagaccaaagccgagacgagggagctctccagtaga
ctcaggatggctggattcagggcggaggccctcaacggcgatatgagtcagccagccaga
gaaaagacgttcaatcgctttaaggacagaaaaactaagatactcgtggcgaccgatgtg
gcagcgagggggcttgacgttccagagataacccacgttatcaactactcaattccaatg
aaccccgaacagtacatccaccggattggtagaactggaaggatgggcaaaaagggaaaa
gccataactttcatcgctcccggagagttgaagcgctttaggtacataacaaagcaggcc
ggtgttgaggtcaggaagtccgagttcagcgagggcattcccagagaatatcgcgagagg
ctgagtcaggaagagctcgaaggagagtaccgcggcaggtgggggtcaatgaagccccgc
cagagaaggaggcggtattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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